Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151691g00003 ATGAAGCTCGGTTATTTGAACGAGCCATCAGTTCTTCACAATATTAAGTTGAGATATTCTCAGGATATGATTTATACTAAAGCAGGGCGCGTTTTAATTGCAGTCAATCCCTTCAAAGATCTCCAGATATTTGGAAATGATCATGTCTCAGCTTATAGGCAGAAACTTACTAATAGTCCTCATGTTTTTGCTGTGGCTGATGAGGCTTTTACAGAGATGATGAGAGATGAAGCAAATCAGTCCATTATCATAAGTGGCGAGAGTGGATCTGGGAAGACAGAGACAGCAAAGATTGTTATGCAGTACTTAGCTGCTCTTGGTGGTAGCAATAGGGGTATAGAAGATAAAATTCTTCAAACGAATCTTGTGCTAGAAGCTTTCGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGGAAGCTGATGGAAATTCATTTCAGCACAATGGGTAAATTCTATGGTGCTAAATCAAGAGTTGTTCAGCTGGCCAGTAGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATTTGTTCTTAAAGAGAGACTTAATCTTAGAGCAGCCAGTTATTATAAATATCTTAATCAGAGTGAATGCTTGATGATTGATGGCATTGATGACGCTAAAAAATTTCATCAGCTGATGAAAGCACTTGATATTGTTCAAATTTGCAAAGAGGACCAAGAGCTGATCTTTACAGTGCTGGCTGCTATACTATGGCTGGGAAATATATCTTTCAAAGTTGCAGACAGTGAAAATCACATTGAGGTTCTGGATGATGAAGCTGTTACCAGTGCTGCTCGGCTGATGGGTTGCAGCACCCAGGCATTGAAGGCAGCATTATCTACTCAGAAAATCCAGTCTGAGAAGGATACTAATGCGAAAAAGTTGATATTGCAGAAGGCAATTCATACCAGAGACAAAATTGCAACATTTATGTATGAAAACTTGTTTAACTGGATTGTAGACCAAGTCAACAAGTCACTTCAAGTGGGTAAACAATATACTGGGAAATCCATCAATATCTTGGATATTAATGGTTTTGAATCATTCCAGAAAAATAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAAAGACTTCAACAGCATCTCATTCGGCATCTGTTTAAGGATGAGCAGGAGGACTATGAGTCAGATGGCATTGAGTGGACTAAAATAGATTTTAAGGACAATCAAGAGTGTGTGAATCTTTTTGAGAAGAAACCTCACAGTCTACTCTCCTTGTTGGATGAGGAATCAAATTTTTCAAAGGCATCTGATCTAACATTTGCAAACAAACTTAAGCAGCACCTGGGGACTAATCCCTGCTTCAAAGGGGAGAGAGGCAGGGCTTTCAGTGTTCGTCATTATGAAGGGGAGGTTCTGTATGATACAAATGGATTTCTAGAAAAGAACAGAAATACTATGCCTTCTGATTCTATTCAATTCCTCGCATCATGCAAATGTGAACTGCTGCCATTGTTCTCCAAAACGTTTGATCTATCTCTGAAGTGTTCACAGGAGCAGAGCGTCTGCCAAAAGTTTAAGGGTCAATTATTTAATTTGATGGACCAGTTGGAGTGCACCACGCCCCACTTCATTCGATGCATAAGGCCAAATATTAAGCAGCTGCCTGATATTTATGATGAAGGCCTTGTCCTACAACAGCTCAAGTGTAGTGGGATACTTGAGGTTGTTAGAATTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTGCACAAGGTATGGGTTTCTGCTTTCTGAGGCCAACAAATCTCAAGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAGTTTAATATCCCTTCTGAGATGTGCCAGTTTGGCTATACCAAGTTGTATCTTCGAGCTGGGCAGACTGATTCACTTGAGCTCAAGAGAAAACAGGTTTTGCAAGGAACAGTTGTGCTTCAAAAATACTTCCGTGGTTATCAAGCACGGAGTTATTTCCAGGAGCTTAAGAGTGGAGTGGCAACATTACAATCATTTGTTCGTGGAGAAATTACAAGAAGAAAAGTTGGTGTTATGATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCTATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACAACAAATGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGGCGGAAGCCACTTGTTAAGATTCTAGAAGTAAAGGATATATCCAAAGAGCGGGTTCAGAATCTACCTTCACCATTAGCCCAGCTACAAAGGCGGGTTGACAAGGCTGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAAAAAGTGGGCTGAATATGAGGCAAAGATGAAATCAATGGAGGAAGCATGGCAAAAACAGAGAGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGCGACAATACTCAATCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTAATGTGGGATCTCGAACAACTGCTGCGAACACTCCAATAAAGTTTTCCAGCAATTTTGCCGTCTCTGATGGAGGCAGAGAGGCTAATGGGATGAGAGAGAGAGGGACAAATGGTACTTTGGGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTCGATGACGAAATTAAAGCTCTGAATGAGGTTAAACCAGGAAACTTGACCACCACGACTTCCATTGAAGAATTTCGTAAGCTCAAGCTTAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGTGAGACAAAAGCAAAGCTGCATGAAGCGGATAAAAGTCGGAGGACTTGGTGGGGGAAGTTAATAAATTGA 2925 0.4014 MKLGYLNEPSVLHNIKLRYSQDMIYTKAGRVLIAVNPFKDLQIFGNDHVSAYRQKLTNSPHVFAVADEAFTEMMRDEANQSIIISGESGSGKTETAKIVMQYLAALGGSNRGIEDKILQTNLVLEAFGNAKTSRNENSSRFGKLMEIHFSTMGKFYGAKSRVVQLASSERSYHIFYQLCAGSSFVLKERLNLRAASYYKYLNQSECLMIDGIDDAKKFHQLMKALDIVQICKEDQELIFTVLAAILWLGNISFKVADSENHIEVLDDEAVTSAARLMGCSTQALKAALSTQKIQSEKDTNAKKLILQKAIHTRDKIATFMYENLFNWIVDQVNKSLQVGKQYTGKSINILDINGFESFQKNSFEQFCINYANERLQQHLIRHLFKDEQEDYESDGIEWTKIDFKDNQECVNLFEKKPHSLLSLLDEESNFSKASDLTFANKLKQHLGTNPCFKGERGRAFSVRHYEGEVLYDTNGFLEKNRNTMPSDSIQFLASCKCELLPLFSKTFDLSLKCSQEQSVCQKFKGQLFNLMDQLECTTPHFIRCIRPNIKQLPDIYDEGLVLQQLKCSGILEVVRISRAGYPTRMTHQEFCTRYGFLLSEANKSQDPLSTSVAILQQFNIPSEMCQFGYTKLYLRAGQTDSLELKRKQVLQGTVVLQKYFRGYQARSYFQELKSGVATLQSFVRGEITRRKVGVMMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTTNGFKSYPENAKHRRKPLVKILEVKDISKERVQNLPSPLAQLQRRVDKAEEENAKLREQLKQSEKKWAEYEAKMKSMEEAWQKQRASLQMSLVAARKSLASDSDNTQSTRNEVLSPRYYGSEDANVGSRTTAANTPIKFSSNFAVSDGGREANGMRERGTNGTLGSLMKEFDQRRQNFDDEIKALNEVKPGNLTTTTSIEEFRKLKLSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLIN 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151691g00003 974 ProSiteProfiles Myosin motor domain profile. 1 647 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 FunFam Myosin heavy chain 170 226 - -
Stsc151691g00003 974 SMART iq_5 708 730 IPR000048 GO:0005515
Stsc151691g00003 974 SMART iq_5 671 693 IPR000048 GO:0005515
Stsc151691g00003 974 SMART iq_5 648 670 IPR000048 GO:0005515
Stsc151691g00003 974 Gene3D - 651 698 - -
Stsc151691g00003 974 ProSiteProfiles IQ motif profile. 651 678 IPR000048 GO:0005515
Stsc151691g00003 974 Coils Coil 770 811 - -
Stsc151691g00003 974 CDD MYSc_Myo8 9 635 IPR036022 -
Stsc151691g00003 974 Gene3D - 170 226 - -
Stsc151691g00003 974 PRINTS Myosin heavy chain signature 346 374 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 PRINTS Myosin heavy chain signature 25 44 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 PRINTS Myosin heavy chain signature 79 104 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 PRINTS Myosin heavy chain signature 399 427 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 PRINTS Myosin heavy chain signature 122 149 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 Coils Coil 899 919 - -
Stsc151691g00003 974 ProSiteProfiles IQ motif profile. 709 737 IPR000048 GO:0005515
Stsc151691g00003 974 Gene3D - 581 648 - -
Stsc151691g00003 974 Gene3D Myosin VI head, motor domain, U50 subdomain 227 335 - -
Stsc151691g00003 974 MobiDBLite consensus disorder prediction 829 861 - -
Stsc151691g00003 974 Gene3D - 358 537 - -
Stsc151691g00003 974 Coils Coil 944 964 - -
Stsc151691g00003 974 ProSiteProfiles IQ motif profile. 672 701 IPR000048 GO:0005515
Stsc151691g00003 974 SMART MYSc_2a 2 648 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 PANTHER MYOSIN 1 964 - -
Stsc151691g00003 974 Pfam Myosin head (motor domain) 2 635 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151691g00003 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 727 IPR027417 -
Stsc151691g00003 974 Gene3D Kinesin motor domain 2 580 IPR036961 -
Stsc151691g00003 974 MobiDBLite consensus disorder prediction 829 846 - -
Stsc151691g00003 974 Pfam IQ calmodulin-binding motif 653 670 IPR000048 GO:0005515
Stsc151691g00003 974 Pfam IQ calmodulin-binding motif 711 728 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151691g00003 Stsc-Chr151691 13257 24141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151691g00003 1 971 Myosins gene family AT5G54280 58.730 0.0 1172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151691g00003 K10357 - gmx:100801876 1323.92