Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151690g00001 ATGGAGCCAAGCTTCTTGCTTTCTCTTTTCATCATCACATGCTTCTCTTTTCACCCTTACAATTCCCATGCAGCTTTGACTTCAATCACTGCAAACCAATTTCTCTCTGGTGATCAAACACTAGTCTCCAAAAATGAAAGCTTTGAACTGGGTTTCTTCAGTCCAGGTAACACCTCTAACTACTACATAGGCATGTGGTACAAAAAAAGAGTCTCTCAAAGAACCTATGTTTGGGTAGCAAATAGAGATAACCCAGTTTCTGATAAATACTCTGCCAAATTAACAATATCTAAGGGCAATTTAGTGCTCTTAGACCAATCCCAAAAACAAGTTTGGTCAACAAATTTAAGTCCTTCAAACTTTGATTCTATAGTAGCTGTGCTTCAGGATAATGGGAATCTTATACTGAGTGATAGGCCTAACCCATCAGAATCAAATTCTCTGTGGCAGAGTTTTGATCATCCAACAGATACATTCCTTCCTGGTGCCAAACTTAAGCTTGATAAAAAAACTGGTACGCCTCAGTACCTAACTTCTTGGAAGAACACTCAAGATCCTGGAACAGGCTTGTTCTCTTTGGAGTTAGACCCAAAAGGAAGCCAAGCTTATTTCATTCTTTGGAACAAAACTGAAGAATATTGGAGCAGTGGCCCTTGGAATGGTCACATTTTCAGCTTAGTACCCGAAATGAGGTTGAATTACATATACAATTTCTCCTTCCATGATGAAGCTGATGAGTCTTACTTCACTTACTCGCTATATAACACTTCGATTATATCGCGTTTCGTGATCGATGTCTCCGGGCAGATCAGGCAGCTTACATGGCTGGACAGTGCACAGAATTGGAACTTGTTTTGGGCTCAGCCGAGGGAGCAGTGCGAGGTTTATACTTCCTGTGGCGCGTTTGGGAGCTGCACTGAGTACTCCATGCCATTCTGCAGCTGTTTGAGTGGTTACGAGCCAAGCTCACCATCCAATTGGAATCTTGAGGATTACTCAAGTGGGTGTGTGAGGAAAACCAAGTTCCAATGTGAGGCAGATGATCTTTCTAGTGGTGCTATGGACAAGTTCGTGGCATTTCCAAACATAGCATTGCCTTCGCTTCCACAAACTGTAAATGCTGCGGATGCAGAGGAATGCGCTTCAACTTGCTTAAAGAACTGTTCTTGCACAGCATATGCATATGACAGTAAAGGTTGTTTAATTTGGAATGGTGACCTCTTGAATGTGCAGCAGCTTTCTCAAGATGATAGTAATGGAGAGACCTTGTTTCTCAAGCTTGCAGCATCTGAATTTCCGAATTCTAAGAGCAACAAGAGGAGAACCATTGTTGCTGTTGCGGGTGCTGTTGGTGGCATGGTGATTGTCCTAGCAGTTATTCTATTTGCCTTGGTTAGGAGAAGGAAACAAGTTCAATCAGGAACATTGGTTGAAGGCTCATTGAAGACATTTGGTTACAGAGATTTGCAAATTGCAACAATGAACTTCTCAGATAGATTGGGAGGAGGAAGTTTTGGTTCTGTCTTCAAGGGGACACTGCCAGATTCAAGTGTCATAGCAGTGAAGAAGCTCGAAAACATTAGTCAAAGTGAGAAACAGTTCCGGACAGAAGTGAGCACAATTGGGACAGTCCAGCATATCAATCTAGTTAGGCTCCACGGATTCTGTTCCGAAGGTACTAGAAAACTTCTGGTCTATGATTACATGCCGAATGGATCCTTGGATTCAATCTTGTTCCATGAGAAGGGCTCCATGTCCAAGGTGTTGGAATGGAAAGAAAGGTACCAAATTGCTCTTGGGACAGCTAAAGGACTGTCTTATCTCCATGAGAAGTGTAGAGACTGCATCATACACTGCGATGTTAAGCCGGAAAACATTCTTTTAGATGCTGATTTTTGTCCAAAAGTGGCACATTTTGGCCTTGCAAAGTTGGTTGGAAGGGACGTTGGTCAAGTCCTCACAACCATGAGAGGAACAAGGGGATATCTCGCTCCGGAATGGAATTCGGGGGTGCCTATAACTGCCAAAGCTGATGTCTATAGCTATGGAATGATGCTGTTCGAGTTTGTTTCTGGTAGAAGAAACTCAGTTCCACCAGAAGATGGACAGGTTAGGTTCTTCCCTACGTGGGCTGCAAACACAACGAGCAAAGGCGGAAATGTGCTTAGCCTTTTGGATCCAAAGTTGAAGGGAAATGCTAACATCAAAGAGGTCATTCGAGTCATCAAAATCGCTTCCTGGTGTGTCCAAGATGATCAGACTTGTAGGCCAACCATGAGTCAGGTAGTTCACATTCTTGATGGCGTGTTGGATGTGGATTTTCCTCCGGTGCCAATATTCCTACAAGCCTTTCTTGAGAACCAAGAAACTTCAGTTTTCTTCATTGACTTAGTCTCTACATAG 2403 0.4299 MEPSFLLSLFIITCFSFHPYNSHAALTSITANQFLSGDQTLVSKNESFELGFFSPGNTSNYYIGMWYKKRVSQRTYVWVANRDNPVSDKYSAKLTISKGNLVLLDQSQKQVWSTNLSPSNFDSIVAVLQDNGNLILSDRPNPSESNSLWQSFDHPTDTFLPGAKLKLDKKTGTPQYLTSWKNTQDPGTGLFSLELDPKGSQAYFILWNKTEEYWSSGPWNGHIFSLVPEMRLNYIYNFSFHDEADESYFTYSLYNTSIISRFVIDVSGQIRQLTWLDSAQNWNLFWAQPREQCEVYTSCGAFGSCTEYSMPFCSCLSGYEPSSPSNWNLEDYSSGCVRKTKFQCEADDLSSGAMDKFVAFPNIALPSLPQTVNAADAEECASTCLKNCSCTAYAYDSKGCLIWNGDLLNVQQLSQDDSNGETLFLKLAASEFPNSKSNKRRTIVAVAGAVGGMVIVLAVILFALVRRRKQVQSGTLVEGSLKTFGYRDLQIATMNFSDRLGGGSFGSVFKGTLPDSSVIAVKKLENISQSEKQFRTEVSTIGTVQHINLVRLHGFCSEGTRKLLVYDYMPNGSLDSILFHEKGSMSKVLEWKERYQIALGTAKGLSYLHEKCRDCIIHCDVKPENILLDADFCPKVAHFGLAKLVGRDVGQVLTTMRGTRGYLAPEWNSGVPITAKADVYSYGMMLFEFVSGRRNSVPPEDGQVRFFPTWAANTTSKGGNVLSLLDPKLKGNANIKEVIRVIKIASWCVQDDQTCRPTMSQVVHILDGVLDVDFPPVPIFLQAFLENQETSVFFIDLVST 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151690g00001 800 Gene3D - 21 153 IPR036426 -
Stsc151690g00001 800 ProSiteProfiles Protein kinase domain profile. 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151690g00001 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 776 - -
Stsc151690g00001 800 Pfam D-mannose binding lectin 75 181 IPR001480 -
Stsc151690g00001 800 FunFam Receptor-like protein kinase 4 462 568 - -
Stsc151690g00001 800 SMART ntp_6 352 427 IPR003609 -
Stsc151690g00001 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 152 - -
Stsc151690g00001 800 SMART serkin_6 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151690g00001 800 SMART blect_4 32 155 IPR001480 -
Stsc151690g00001 800 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Stsc151690g00001 800 Pfam Protein kinase domain 497 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151690g00001 800 SUPERFAMILY Protein kinase-like (PK-like) 481 791 IPR011009 -
Stsc151690g00001 800 Pfam PAN-like domain 353 410 IPR003609 -
Stsc151690g00001 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Stsc151690g00001 800 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544
Stsc151690g00001 800 PANTHER OS07G0415500 PROTEIN 6 780 - -
Stsc151690g00001 800 CDD STKc_IRAK 500 768 - -
Stsc151690g00001 800 ProSiteProfiles PAN/Apple domain profile. 344 428 IPR003609 -
Stsc151690g00001 800 ProSitePatterns Protein kinases ATP-binding region signature. 500 523 IPR017441 GO:0005524
Stsc151690g00001 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 221 IPR036426 -
Stsc151690g00001 800 Gene3D Phosphorylase Kinase; domain 1 460 568 - -
Stsc151690g00001 800 Gene3D Transferase(Phosphotransferase) domain 1 569 773 - -
Stsc151690g00001 800 SUPERFAMILY Hairpin loop containing domain-like 353 416 - -
Stsc151690g00001 800 CDD B_lectin 32 155 IPR001480 -
Stsc151690g00001 800 PIRSF SRK 1 794 IPR024171 GO:0004674
Stsc151690g00001 800 CDD PAN_AP_plant 343 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151690g00001 Stsc-Chr151690 10595 13053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151690g00001 441 776 Receptor kinase-like Gene Family AT5G20050 38.649 1.81e-73 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc151690g00001 Pkinase 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151690g00001 - - ahf:112789715 1229.16