Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151688g00003 ATGGCTGCGGATTCGAATATTGAGGGCTTGGTGCTAGATCCTTCTAAATGTAGTAAGCTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAATTGTCCAAGTGGTCTCATGGTGCATCCGAGATGCTACAGTCATGGAGCCGTCAAGAAATTTTGCAAATCTTGTGTGCAGAGATGGGGAAAGAAAGGAAGTATACTGGGTTGACGAAGTTGAAAATTATAGAGAACCTTCTAAAAATTGTTTCTGAAAAGAAATCTGCGGGGCAAGAAACTGCCACAGACTCTGAACCACAGCAATCTTCTCCTGCAAATGGTCAGAAACCTGCCAAAAGGCAGAGAAAAACTGAGAATCCGTCTCGATTGCCGGTGCCTGCAACCAATGTTCCAGTTAATAATGGTGGTGATGTGGGTAGCGTCACATGCTGCAAAAACTCAGCTTGCAAAGCTGCGCTGAATCCAGCTGATAAATTCTGCAAACGGTGTTCATGCTGCATTTGTCATCAATATGACGACAACAAGGATCCTAGCCTGTGGTTAATATGCAGCTCTGAGTCACCTTTTCCTGGCGTTTCATGTGGCTTGTCATGCCACCTCGAGTGTGCTATAAAACATGTTGATTCTGGAATTGGCAAAGATAGTGAACGTCCCAAGCTTGATGGAAGCTTCTATTGTGTCTCTTGTGGGAAAGTAAATGATTTACTCGGGTGCATGAGAAAACAACTGACAGTGGCAAAGGATACCAGACGTGTGGACATACTTTGTTACCGTGTCTCCTTGAGCCAAAGACTTCTTCAAGGGACTGAAATGTATCAAAAGCTTTATGAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGATGTGGGTCCATTGACCAGCTCACCAGCAAAGATTGGTAGGGGGATTGTGAATAGGCTTTCATCTGGACCAGAGGTTCAGAAACTCTGTGGATCTGCTCTGGAATCTCTTGATTCACTGCTTTTGAAAAGGGTCTCGCCTGTGTCTCCCAATCCAACTACTCACCGGGATCACTCAGCACCTAACGATGCACATACACTTGCTCCAAACATGGTGAGGTTTGAAGACATCAGTGCAACGTCTCTTGCTATTGTTTTGGGTTCTGAAAATCATGGAGAAAACATTTCTGGTTACACCTTTTGGCATCGCAAATCTGATGATGAGGATTACCCTGTGGACCCTACTTGCACTTTGCTTCTTCCAAATAGGAGATTCAGTATCAGAGATCTTATTCCTGCCACAGAATACACTTTCAAAGTTGTTTCTAATGACTCAAGGGAGTCAGGTATGTGTGAAGTTCATATCTCAACGGAGCACGGTGAGGATGAAGTCCCTAATTGCTCGGCAACAGAAAGAAGCCAGAGCCCAGTAACCAATTGCAGCAGCCTTTCCAATCCATCTTCAGTGGAAGATGAAACTAATAACAGCAATCCATATAGCGACCAGACTGATAATCGCTTAGAAAACTATCATAATTATTGCAAGGATTCTGATCAAGTTGCTACTGGAAATTTATCAAGTGGTGCGATTATCTGTTCCAATAAAGGTGGAGCAGGACTTCCCACTGATGCTGATTCATTGTCGGACAAGCAGCATTCTGCAGGAATAGCTGGCCCAGTTCCAGGTTCTGATGTACTAAAGCTTGAAAACAATCATTCACCGGAGGAACAAGTTACTGAAGACATGAGTGTTGATGATGGGTTGAATTCACCAGTGTTAACTGAAAGAGAATGTGTGCCATTAGTAGCTAGCTCAGAAGGAGGCTTACCTAATACTCCATGCAAGTTGGAAATACTCAAGGATGGGCCAGGAAGAAATGGGAGATCTAAATCTGGTGGCAAAGATCAAGAAAATGGATCCGGGAAGAGGGAAGGGGCACGAGACGGGAGCACGTCAAAGAAGAGAAGCGGGGAAAGGCCAGATGAGGGCTGCACAGCCAACGGGTTTTCAGATCGTGATTTTGAGTATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGGCACATTGAGAAGAATTTCAGGCAGAAGTTTCTGACTTGGTATAGCTTAAGAGCAACCCAACAAGAAGTGAGGATTGTGAAAATATACATAGACACATTTCTTGAAGATCCAGCATCTCTTGCTGAGCAACTTGTGGACACTTTCACAGAATGCATATCCAGCAAGAGAACTTCAGTGGTACCTGCAGGATTCTGCATGAAGCTTTGGCATTGA 2235 0.4385 MAADSNIEGLVLDPSKCSKLSMEEKRELVYELSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSAGQETATDSEPQQSSPANGQKPAKRQRKTENPSRLPVPATNVPVNNGGDVGSVTCCKNSACKAALNPADKFCKRCSCCICHQYDDNKDPSLWLICSSESPFPGVSCGLSCHLECAIKHVDSGIGKDSERPKLDGSFYCVSCGKVNDLLGCMRKQLTVAKDTRRVDILCYRVSLSQRLLQGTEMYQKLYEIVDEAVKKLEPDVGPLTSSPAKIGRGIVNRLSSGPEVQKLCGSALESLDSLLLKRVSPVSPNPTTHRDHSAPNDAHTLAPNMVRFEDISATSLAIVLGSENHGENISGYTFWHRKSDDEDYPVDPTCTLLLPNRRFSIRDLIPATEYTFKVVSNDSRESGMCEVHISTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYSDQTDNRLENYHNYCKDSDQVATGNLSSGAIICSNKGGAGLPTDADSLSDKQHSAGIAGPVPGSDVLKLENNHSPEEQVTEDMSVDDGLNSPVLTERECVPLVASSEGGLPNTPCKLEILKDGPGRNGRSKSGGKDQENGSGKREGARDGSTSKKRSGERPDEGCTANGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATQQEVRIVKIYIDTFLEDPASLAEQLVDTFTECISSKRTSVVPAGFCMKLWH 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151688g00003 744 Gene3D Immunoglobulins 353 466 IPR013783 -
Stsc151688g00003 744 MobiDBLite consensus disorder prediction 598 651 - -
Stsc151688g00003 744 CDD PHD_VIN3_plant 162 227 - -
Stsc151688g00003 744 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 744 IPR044514 GO:0010048|GO:0040029
Stsc151688g00003 744 MobiDBLite consensus disorder prediction 607 651 - -
Stsc151688g00003 744 CDD FN3 354 434 IPR003961 GO:0005515
Stsc151688g00003 744 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Stsc151688g00003 744 SUPERFAMILY Fibronectin type III 355 431 IPR036116 GO:0005515
Stsc151688g00003 744 MobiDBLite consensus disorder prediction 453 492 - -
Stsc151688g00003 744 MobiDBLite consensus disorder prediction 443 492 - -
Stsc151688g00003 744 MobiDBLite consensus disorder prediction 88 129 - -
Stsc151688g00003 744 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151688g00003 Stsc-Chr151688 25201 30097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151688g00003 4 491 PHD Gene Family AT4G30200 53.654 1.40e-162 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151688g00003 - - adu:107460123 1424.84