Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151681g00003 | ATGAGAACTCTCTGCGACGTATGCGAAAACGCCGCTGCAATCTTATTCTGCGCCGCCGACGAGGCTGCTCTTTGCCGCGCCTGCGATGACAAGGTGCACATGTGTAACAAACTTGCTAGTAGACATGTTCGAGTTGGACTTGCTGACCCTAGTGATGTTCCTCGTTGTGATATATGTGAAAATGCACCTGGTGACAAAACTGGTAGATTGGATGAACTGGGAATGCAAACCTTAGATCAAAATGGAAAAATGGACAAAAAGCTGTTTGATCTTAATACTAGGCCACAGCGGATAAATGGCTCAACATCAAACAACTTGGATAAAGAGATATTGGGTGGTAACAATCATGATTCTATTGGTGTTGTACCAGTCGAATTGTTCAAACAAGAAGCTGAGAAGTAA | 402 | 0.4353 | MRTLCDVCENAAAILFCAADEAALCRACDDKVHMCNKLASRHVRVGLADPSDVPRCDICENAPGDKTGRLDELGMQTLDQNGKMDKKLFDLNTRPQRINGSTSNNLDKEILGGNNHDSIGVVPVELFKQEAEK | 133 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151681g00003 | 133 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 64 | - | - | |
Stsc151681g00003 | 133 | MobiDBLite | consensus disorder prediction | 94 | 111 | - | - | |
Stsc151681g00003 | 133 | Pfam | B-box zinc finger | 3 | 42 | IPR000315 | GO:0008270 | |
Stsc151681g00003 | 133 | MobiDBLite | consensus disorder prediction | 93 | 112 | - | - | |
Stsc151681g00003 | 133 | CDD | Bbox1_BBX-like | 4 | 47 | - | - | |
Stsc151681g00003 | 133 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Stsc151681g00003 | 133 | SMART | bboxneu5 | 1 | 47 | IPR000315 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151681g00003 | Stsc-Chr151681 | 13227 | 15154 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151681g00003 | 1 | 133 | C2C2-CO-like Transcription Factor Family | AT4G38960 | 46.995 | 1.31e-45 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Stsc151681g00003 | zf-B_box | 2e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151681g00003 | - | - | gmx:100527369 | 179.489 |