Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151679g00008 ATGGCTCTGTACGGCGAGAAAGAGTGGTATTTCTTCTCTCCAAGGGACCGCAAATATCCGAACGGTTCACGCCCAAACCGGGCCGCGGGCTCAGGGTACTGGAAGGCCACGGGTGCCGATAAGCCGATTGGAAAGCCCAAGGCGCTGGCCATCAAGAAGGCACTGGTGTTCTACGCTGGGAAAGCCCCCAAAGGAGTGAAAACCAATTGGATCATGCATGAATATAGACTGGCTAATGTTGACAGATCGGCAGGCAAGAAAAATAACTTAAGGCTTGATGATTGGGTGCTATGCCGGATTTACAACAAGAAAGGCAAGATTGAGAAATACGACAGCCTTGGGGCTGGGGCCTTGGATAACAAATCAGTATCGTCGGAGGAGGAGGATATGGAGATCAAGCCCGAGATGAAGCATATGGACACGTCGTCGGATTCGGTGGTATCGCCGGATGTGACGTGGGAGGAGAGTAGGGAGGTGCAGAGCGAGCCCAAGTGGAATGACCTCCTTGACCAAGTCTTTGATTTCCAGTTCCCTAATAATTTCATTGATTTCTCATCCCCTGGAGATGACCCTTTTGCCCCCCACCTTTCTCCTTCTCCTTGGCAGCAGCAGCAGGAGGACATGTTCATCACATTTTGA 639 0.5133 MALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIEKYDSLGAGALDNKSVSSEEEDMEIKPEMKHMDTSSDSVVSPDVTWEESREVQSEPKWNDLLDQVFDFQFPNNFIDFSSPGDDPFAPHLSPSPWQQQQEDMFITF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151679g00008 212 Pfam No apical meristem (NAM) protein 5 77 IPR003441 GO:0003677|GO:0006355
Stsc151679g00008 212 ProSiteProfiles NAC domain profile. 1 103 IPR003441 GO:0003677|GO:0006355
Stsc151679g00008 212 MobiDBLite consensus disorder prediction 133 159 - -
Stsc151679g00008 212 PANTHER NAC TRANSCRIPTION FACTOR 56 3 142 - -
Stsc151679g00008 212 Gene3D NAC domain 1 108 IPR036093 GO:0003677|GO:0006355
Stsc151679g00008 212 SUPERFAMILY NAC domain 3 103 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151679g00008 Stsc-Chr151679 19194 20619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151679g00008 1 212 NAC Transcription Factor Family AT5G08790 59.821 4.90e-80 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc151679g00008 NAM 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151679g00008 - - aew:130777754 272.707