Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151679g00007 ATGAAGAGTGAATTGGAATTACCACCTGGTTTCAGGTTCCACCCCACTGACGAGGAGCTTGTCAATCACTACTTGTGCAGGAAATGTGCTTCACAGTCCATTGCTGTTCCCATCATCAAGGAGATCGATTTGTACAAGTTTGATCCATGGCACCTTCCAGAGATGGCTCTGTACGGCGAGAAAGAGTGGTATTTCTTCTCTCCAAGGGACCGCAAATATCCGAACGGTTCACGCCCAAACCGGGCCGCGGGCTCAGGGTACTGGAAGGCCACGGGTGCCGATAAGCCGATTGGAAAGCCCAAGGCGCTGGCCATCAAGAAGGCACTGGTGTTCTACGCTGGGAAAGCCCCCAAAGGAGTGAAAACCAATTGGATCATGCATGAATATAGACTGGCTAATGTTGACAGATCGGCAGGCAAGAAAAATAACTTAAGGCTTGATGATTGGGTGCTATGCCGGATTTACAACAAGAAAGGCAAGATTGAGAAATACGACAGCCTTGGGGCTGGGGCCTTGGATAACAAATCAGTATCGTCGGAGGAGGAGGATATGGAGATCAAGCCCGAGATGAAGCATATGGACACGTCGTCGGATTCGGTGGTATCGCCGGATGTGACGTGGGAGGAGAGTAGGGAGGTGCAGAGCGAGCCCAAGTGGAATGACCTCCTTGACCAAGTCTTTGATTTCCAGTTCCCTAATAATTTCATTGATTTCTCATCCCCTGGAGATGACCCTTTTGCCCCCCACCTTTCTCCTTCTCCTTGGCAGCAGCAGCAGGAGGACATGTTCATCACATTTTGA 801 0.5031 MKSELELPPGFRFHPTDEELVNHYLCRKCASQSIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIEKYDSLGAGALDNKSVSSEEEDMEIKPEMKHMDTSSDSVVSPDVTWEESREVQSEPKWNDLLDQVFDFQFPNNFIDFSSPGDDPFAPHLSPSPWQQQQEDMFITF 266
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc151679g00007 266 PANTHER NAC TRANSCRIPTION FACTOR 56 7 194 - -
Stsc151679g00007 266 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Stsc151679g00007 266 FunFam NAC transcription factor 16 161 - -
Stsc151679g00007 266 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Stsc151679g00007 266 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Stsc151679g00007 266 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc151679g00007 Stsc-Chr151679 19194 20619 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151679g00007 1 266 NAC Transcription Factor Family AT5G08790 63.309 1.68e-115 331
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc151679g00007 NAM 5.6e-38 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151679g00007 - - gmx:100814504 372.859