Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151679g00007 | ATGAAGAGTGAATTGGAATTACCACCTGGTTTCAGGTTCCACCCCACTGACGAGGAGCTTGTCAATCACTACTTGTGCAGGAAATGTGCTTCACAGTCCATTGCTGTTCCCATCATCAAGGAGATCGATTTGTACAAGTTTGATCCATGGCACCTTCCAGAGATGGCTCTGTACGGCGAGAAAGAGTGGTATTTCTTCTCTCCAAGGGACCGCAAATATCCGAACGGTTCACGCCCAAACCGGGCCGCGGGCTCAGGGTACTGGAAGGCCACGGGTGCCGATAAGCCGATTGGAAAGCCCAAGGCGCTGGCCATCAAGAAGGCACTGGTGTTCTACGCTGGGAAAGCCCCCAAAGGAGTGAAAACCAATTGGATCATGCATGAATATAGACTGGCTAATGTTGACAGATCGGCAGGCAAGAAAAATAACTTAAGGCTTGATGATTGGGTGCTATGCCGGATTTACAACAAGAAAGGCAAGATTGAGAAATACGACAGCCTTGGGGCTGGGGCCTTGGATAACAAATCAGTATCGTCGGAGGAGGAGGATATGGAGATCAAGCCCGAGATGAAGCATATGGACACGTCGTCGGATTCGGTGGTATCGCCGGATGTGACGTGGGAGGAGAGTAGGGAGGTGCAGAGCGAGCCCAAGTGGAATGACCTCCTTGACCAAGTCTTTGATTTCCAGTTCCCTAATAATTTCATTGATTTCTCATCCCCTGGAGATGACCCTTTTGCCCCCCACCTTTCTCCTTCTCCTTGGCAGCAGCAGCAGGAGGACATGTTCATCACATTTTGA | 801 | 0.5031 | MKSELELPPGFRFHPTDEELVNHYLCRKCASQSIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIEKYDSLGAGALDNKSVSSEEEDMEIKPEMKHMDTSSDSVVSPDVTWEESREVQSEPKWNDLLDQVFDFQFPNNFIDFSSPGDDPFAPHLSPSPWQQQQEDMFITF | 266 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151679g00007 | 266 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 7 | 194 | - | - | |
Stsc151679g00007 | 266 | ProSiteProfiles | NAC domain profile. | 7 | 157 | IPR003441 | GO:0003677|GO:0006355 | |
Stsc151679g00007 | 266 | FunFam | NAC transcription factor | 16 | 161 | - | - | |
Stsc151679g00007 | 266 | Pfam | No apical meristem (NAM) protein | 8 | 131 | IPR003441 | GO:0003677|GO:0006355 | |
Stsc151679g00007 | 266 | Gene3D | NAC domain | 16 | 162 | IPR036093 | GO:0003677|GO:0006355 | |
Stsc151679g00007 | 266 | SUPERFAMILY | NAC domain | 4 | 157 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151679g00007 | Stsc-Chr151679 | 19194 | 20619 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151679g00007 | 1 | 266 | NAC Transcription Factor Family | AT5G08790 | 63.309 | 1.68e-115 | 331 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Stsc151679g00007 | NAM | 5.6e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151679g00007 | - | - | gmx:100814504 | 372.859 |