Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151679g00005 ATGGAATCAAAAGACATGTCTCGTATTGTGTCCCTAACCCAGTTTTCTCGGCTGGTGAAGCTCTTGGATGAAGATAAAGTATCTGACAAGATTGTTTTTGGAGGTCAGAGGGATGAAAAGAAACTAAAGATTGCACCAACTATCTTATTGGATGTTCCAGATGATGCAATGGTAATGCAGGAGGAGATATTTGGGCCAATAATGCCAATCATCACTGTAGAAAATATAGAAGATAGCTTTGGCATAATAAAATCCAAGCCAAAACCTCTTGCAGCTTATCTCTTCACAAACAATGAGCAGTTAAAGAAGGCATATGTGGAAAATGTATCTTCTGGAGGGATGCTCATCAATGACACTATCATACATGTTGCGACACGTGGTTTGCCTTTTGGAGGAGTTGAAGAAAGTGGAATGGGATGTTACCATGGGAAATTCTCATTTGATAGTTTCAGCCATAAGAAGTCAGTCCTCTATAGAAGTTTTGAGGCAGATTCATCCTTGAGGTTCCCTCCATATACACCCCAGAAGGAAAAATTGTTGAAGGCCATTTTCAGTGGCAACATTATTCGCATTATTCTTACTTTGCTTGGAGGATGGTCTTAA 603 0.3964 MESKDMSRIVSLTQFSRLVKLLDEDKVSDKIVFGGQRDEKKLKIAPTILLDVPDDAMVMQEEIFGPIMPIITVENIEDSFGIIKSKPKPLAAYLFTNNEQLKKAYVENVSSGGMLINDTIIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKSVLYRSFEADSSLRFPPYTPQKEKLLKAIFSGNIIRIILTLLGGWS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151679g00005 200 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 137 154 IPR016162 GO:0016491
Stsc151679g00005 200 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 2 136 IPR016163 GO:0016620
Stsc151679g00005 200 PANTHER ALDEHYDE DEHYDROGENASE 2 191 IPR012394 GO:0006081
Stsc151679g00005 200 Pfam Aldehyde dehydrogenase family 4 156 IPR015590 GO:0016491
Stsc151679g00005 200 SUPERFAMILY ALDH-like 3 170 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151679g00005 Stsc-Chr151679 13649 14528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151679g00005 1 197 Aldehyde Dehydrogenase Gene Family AT1G44170 61.421 1.61e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151679g00005 K00128 - gmx:100800699 335.495