Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151679g00002 ATGTCAAAGCTTCCATTTCCAAGCTATTCTCAAGAGAGTGGAACTGACAGCTTTCACAAGTTCTTTGAGAGATGGCTTGTTGAGCAAAACCAACACCTGAAGGAGCTGGTTGCATCTGAAGCAACAAAGCTCACAGATGAGAAACTCCAGGCTCTGATTGGTGAAGTTGTTGAGCATTATGAGAGCTATTACAAGGCCAAGTCAAAGTGGGCAAAGCATGATGTTTTGGCCATGCTGTCTCCAACATGGAGAAGCTCCTTGGAAGATGCTTTTCTTTGGATTGGTGGTTGGAGACCAAGCATGGCATTTCACCTTCTATATTCCAAGTCTGGGTTGCAATTTGAGGCCAAGTTGAAGGAACTCCTTCAGGGTCTAAGAACATCTGATCTGGCTGATCTATCTGCAACTCAACTAGCTCAAGTTGATGATATTCAGAAGAGGACCATCACTGAGGAGAGGGAAATCACAGATATGATGGCAAGGCATCAAGAAACAGTGGCAGATGCATCAATGGTGGAGCTTTCTCATGTTGTTTCTGAGATGTTAAGGGCCAACGAAACTGAGGAGGGTGGAAGAAAAGAGGTAGAGGACAAGGTTGATTCAACTCTGATGCCAAAGGAAGAAGGATTGGAAGAGATTTTGCAAAGAGCTGATGATTTAAGGCTCAGAACACTTCAAGGTATTGTTAAGATTCTGAGGCCAAAACAGTGTATTCACTTCTTGATCGCTGCTGCAGAACTACATCTGAGGCTGCATGAGTGGGGCAAGAAGAGGGATACAAGCAGAAGGGTCAATATTCAATAA 804 0.4403 MSKLPFPSYSQESGTDSFHKFFERWLVEQNQHLKELVASEATKLTDEKLQALIGEVVEHYESYYKAKSKWAKHDVLAMLSPTWRSSLEDAFLWIGGWRPSMAFHLLYSKSGLQFEAKLKELLQGLRTSDLADLSATQLAQVDDIQKRTITEEREITDMMARHQETVADASMVELSHVVSEMLRANETEEGGRKEVEDKVDSTLMPKEEGLEEILQRADDLRLRTLQGIVKILRPKQCIHFLIAAAELHLRLHEWGKKRDTSRRVNIQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151679g00002 267 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 17 264 - -
Stsc151679g00002 267 ProSiteProfiles DOG1 domain profile. 15 261 IPR025422 GO:0006351|GO:0043565
Stsc151679g00002 267 Pfam Seed dormancy control 32 108 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151679g00002 Stsc-Chr151679 4914 5970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151679g00002 14 251 bZIP Transcription Factor Family AT5G06960 28.571 2.53e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151679g00002 - - gmx:100784399 365.54