Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151671g00002 ATGAGCGTCTCGCATCACCGTCCTCTTGCAGAAAAATCATCTTTCCAGTCCATCATTCGTATCACCGTTCTTACTGAAGCAATACTCATCAAGCTCTTGATCACCGACCTCCGTTCATGCACGCTGCCTCCATCGTTCGTCAACCTTCGTTTCTTCTACTTCGGCGCTGTCGTAGTTAGTGATCTTTGCCGTCTTCAACAGCTTCTTCAAGAGGTTCGTTCATCAACCTTCGTTCCTTCTCCCCATCAACGGCGACGCCATTGTCGTCCTTCTACTCCGGTGCCGTCGTGGTTAGTGATCTCTGCCGTCTTCAACAGCTTCTTCAAGAGGTTCTTCTTCTTCTTCAAGAGCTTCTTCTTCGTGAAGAGCTTCTTCTTTGTTCGAAACATTTTGAGAGAATTGACTAATGTTAGTCAGGAACAACATCATGAAGTTCGTTCTAGTGAAGAAGCCCTTCAGCATGAAGAGGTACCAGATCATTCTAATCTATGTGATGCTAAAATTCCAAAAGAGTGCATGTCTTTTCAATCTTGTGGTGAAGCTCATGGATTTTATAAGAACTATGCTTCCAAAGTGGGTTTTTTGGTCAAAATCAAGACCACTAATTATGTTCAGAATGTTAATGGAGAGAACATAATTGCAAACAAATCTATTCTTTGTAACAAGCATGGCAATCGGACTTCTCATGTACTTGCTCCCATCAGATCTAAGAAGATTTCATCAGAAAATTGCAAGGCTAGGGTTTATGTGAAGTTGGACAAAGAAAAAGGGACTTGA 777 0.4221 MSVSHHRPLAEKSSFQSIIRITVLTEAILIKLLITDLRSCTLPPSFVNLRFFYFGAVVVSDLCRLQQLLQEVRSSTFVPSPHQRRRHCRPSTPVPSWLVISAVFNSFFKRFFFFFKSFFFVKSFFFVRNILRELTNVSQEQHHEVRSSEEALQHEEVPDHSNLCDAKIPKECMSFQSCGEAHGFYKNYASKVGFLVKIKTTNYVQNVNGENIIANKSILCNKHGNRTSHVLAPIRSKKISSENCKARVYVKLDKEKGT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151671g00002 258 Pfam FAR1 DNA-binding domain 184 255 IPR004330 -
Stsc151671g00002 258 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 138 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151671g00002 Stsc-Chr151671 26066 29721 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151671g00002 FAR1 1.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151671g00002 - - ahf:114925969 94.3597