LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151663g00002	ATGTTTGAGAGAAACTCAGCAAAGGATGGAAACTTATTCTCTGTATGGAACTTCGATGGCAAAATTGCATTCCAAGACATAATAGAAGCAACACAAAACTTTGATATCAGATACTGCATTGGAACTGGTGCATATGGTAGCGTCTACAAAGCCGAATTGCCACGTGGAATAAACGTGGCTTTGAAGAAACTTCATCAACTCGAATCTCAAAACATGTCCTTTGTGAGAAGCTTTCATAATGAGGTTAAGATGTTAACAGAAATTCCTCATAAGAACATTGTGAAGCTTCATAGATTTTGCCTCCACAAACAATACATGTTCTTGATCTACCAATACATGGAGAGAGGAAGCTTGTTTTCTTTGCTTAACCATGATGATGAAGCAAAGGAATTGTGTTGGAACAAGAGAATGATGTCCTGA	420	0.3762	MFERNSAKDGNLFSVWNFDGKIAFQDIIEATQNFDIRYCIGTGAYGSVYKAELPRGINVALKKLHQLESQNMSFVRSFHNEVKMLTEIPHKNIVKLHRFCLHKQYMFLIYQYMERGSLFSLLNHDDEAKELCWNKRMMS	139

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151663g00002	139	PANTHER	LEUCINE RICH REPEAT KINASE 2	4	137	-	-
	Stsc151663g00002	139	Pfam	Protein kinase domain	39	127	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc151663g00002	139	SUPERFAMILY	Protein kinase-like (PK-like)	13	135	IPR011009	-
	Stsc151663g00002	139	ProSiteProfiles	Protein kinase domain profile.	34	139	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc151663g00002	139	Gene3D	Phosphorylase Kinase; domain 1	3	112	-	-
	Stsc151663g00002	139	ProSitePatterns	Protein kinases ATP-binding region signature.	40	62	IPR017441	GO:0005524
	Stsc151663g00002	139	FunFam	Leucine-rich repeat receptor protein kinase MSP1	1	112	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151663g00002	Stsc-Chr151663	5483	5902	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151663g00002	5	137	Receptor kinase-like Gene Family	AT4G08850	50.000	6.61e-40	140

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Stsc151663g00002		PK_Tyr_Ser-Thr	5e-16	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151663g00002	-		-	gmx:102667972	213.386