Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151662g00005 ATGGCTCCAGAGTATGCAATGGAAGGACTCTTCTCAGTAAAATCGGACGTGTTCAGCTTCGGTGTCATGTTACTTGAAATAATCAATGGAAAAAGAAATAGTGGATTCTACACAACAGAACTTGCCCCATCACTACTGGCATATGCATGGCAGCTATGGAATGAAGAGAGGAAGTTGGAATTTGTGGATCCAGTGTTGTTGGAATCGTGTGTGTGCTGTGAAGAAGTTGTGAGGTGCATGCACATTGGACTTGTGTGTGTGCAGGAAGATCCTGAGCTAAGGCCTAAAATGTCAAGCGTGGTGGTTCTCCTAGGAAGTGAACAAATTGCTCTTCCAAAACCAAGTCAACCAGCATTTTCATTGCGTAGGGCCTTTCATGTTGATCTAGATCCAAGTCCAGCCACTGCAACAAATCCTTCTGTGAATGGGGGGAGTATATTCTCCAGTGTTTTACCTAGATGA 462 0.4416 MAPEYAMEGLFSVKSDVFSFGVMLLEIINGKRNSGFYTTELAPSLLAYAWQLWNEERKLEFVDPVLLESCVCCEEVVRCMHIGLVCVQEDPELRPKMSSVVVLLGSEQIALPKPSQPAFSLRRAFHVDLDPSPATATNPSVNGGSIFSSVLPR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151662g00005 153 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Stsc151662g00005 153 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 125 - -
Stsc151662g00005 153 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Stsc151662g00005 153 SUPERFAMILY Protein kinase-like (PK-like) 1 104 IPR011009 -
Stsc151662g00005 153 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151662g00005 Stsc-Chr151662 9370 10209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151662g00005 1 153 Receptor kinase-like Gene Family AT4G23140 48.077 2.53e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151662g00005 PK_Tyr_Ser-Thr 3.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151662g00005 - - adu:107488598 265.774