Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151662g00004 ATGTCAAACAAAAGCCTTGATCAATTTATCTTTGATCCAGAGAAACGTTCCGAGTTCGATTGGCAGACTTGGTATGGCATCATCATTGGCATTGCAAGAGGACTGCTTTATCTTCATGAAGAGTCTCGGCTGAAAATCATTCACAGGGATTTAAAGCCAAACAATGTGTTGTTGGACCATGACATGGTTGCCAAAATATCAGATTTCGGTATGGCTAGAATATTTTTCGAGAATCAGAATACAGCAAATACAAAGAGAGTTGTAGGAACATATGGATATATGGCTCCAGAGTATGCAATGGAAGGACTCTTCTCAGTAAAATCGGACGTGTTCAGCTTCGGTGTCATGTTACTTGAAATAATCAATGGAAAAAGAAATAGTGGATTCTACACAACAGAACTTGCCCCATCACTACTGGCATATGCATGGCAGCTATGGAATGAAGAGAGGAAGTTGGAATTTGTGGATCCAGTGTTGTTGGAATCGTGTGTGTGCTGTGAAGAAGTTGTGAGGTGCATGCACATTGGACTTGTGTGTGTGCAGGAAGATCCTGAGCTAAGGCCTAAAATGTCAAGCGTGGTGGTTCTCCTAGGAAGTGAACAAATTGCTCTTCCAAAACCAAGTCAACCAGCATTTTCATTGCGTAGGGCCTTTCATGTTGATCTAGATCCAAGTCCAGCCACTGCAACAAATCCTTCTGTGAATGGGGGGAGTATATTCTCCAGTGTTTTACCTAGATGA 741 0.4197 MSNKSLDQFIFDPEKRSEFDWQTWYGIIIGIARGLLYLHEESRLKIIHRDLKPNNVLLDHDMVAKISDFGMARIFFENQNTANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVMLLEIINGKRNSGFYTTELAPSLLAYAWQLWNEERKLEFVDPVLLESCVCCEEVVRCMHIGLVCVQEDPELRPKMSSVVVLLGSEQIALPKPSQPAFSLRRAFHVDLDPSPATATNPSVNGGSIFSSVLPR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151662g00004 246 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151662g00004 246 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151662g00004 246 Gene3D Transferase(Phosphotransferase) domain 1 1 205 - -
Stsc151662g00004 246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Stsc151662g00004 246 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 216 - -
Stsc151662g00004 246 Pfam Protein tyrosine and serine/threonine kinase 3 195 IPR001245 GO:0004672|GO:0006468
Stsc151662g00004 246 FunFam Uncharacterized protein 1 203 - -
Stsc151662g00004 246 SUPERFAMILY Protein kinase-like (PK-like) 1 196 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151662g00004 Stsc-Chr151662 9370 11003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151662g00004 1 234 Receptor kinase-like Gene Family AT4G23150 55.983 5.38e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151662g00004 PK_Tyr_Ser-Thr 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151662g00004 - - adu:107488598 449.514