Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151662g00002 ATGTATCTCTCCCCCAACAACACAACTTTTTTGTTGATTCTAATCTCAATTTCTATGCTAATGAATCACAGTAATTGCATACCAACATACAACTACCATGTCTGTAGAGATCCAATATTGGAGAATGCAAGCAACAGTGATATTTTCCAATCTGAGCTAACTTCCCTTTTGGAAATTTTATCTTTAGCAGCTTCCTCTAAGAGCTTCTACAATGCTAGTATTTCCAAGAGGCTTTATGGGCTCTTCCTCTGCAGGGGTGACGTTTCCGCTAAAACCTGCAAAAAATGTACTGGAATTGCCAGCCAAGAAATCAAAAGCAAGTGCGTATGGAATTCTAGCGGAGTAATCTGGTATGACGAATGCATGGTTAGGTACTCCAAGGAAAACTTCTTTGGGGTGGCAAAAACTAGTCCATTAGCATTCGTTTGGAACACCAATGACAAAAATAGAACTTCACCTAGTGAAACTCATCTGAATGCACAAGCACTGATGTACCCGTTGATACAAGATGCCTCAAGTAGGAAGAGGCGGTTCAAATTAGGGAAATCTACTGTGTGTGATGGGTCGGAGAGATATGGGTTAGCGCAGTGTACAAGGGATATAAATAAATCTTCATGCATCTCTTGTTTGACTCATTTGATGAATAAATCTGGGCAGTGTTGCCAACACAAAGTTGGGTGGCGCTTACTGGCTCCTTCTTGCTATATCAGGTACGAAAAGGATATCTTCTATGGGGATACTACAGGGCCACTAATATCACCTAATACTCAAAAACCAGTACTACCAACCAAAGATAACGGAAAACGCGTTCAAAAACTCCTTATATTCCACATGATCATTCCAATTACAAGTTGTTTGCTCTTCTATCTCATCTGGTCTTCAACTCAACTCAGGAAAGGACCACAACAAGGGGAAGGGCTTACCGATGTAATTCAAGGAATGAATGTTACACATGAAGACAATAAGGGAGAAGTACAATACTTTAGTTTGAGCACGATTAAGGTTGCTACCAACAGTTTTTCTGATGACAACAAGCTAGGTGAAGGGGGCTTTGGGCCTGTTTTCAAGGGGAAGTTAAGTAACGGCAAGGAAATAGCAGTTAAAAGGCTTTCATTCAAATCAAGGCAAGGCATTGAAGAATTCAAGAATGAAATGACGTTGATTGCAAAACTTCAACACAAAAATCTTGTTAGGATCTTGGGATGCTGCATTGATAGAAACGAAAAGCTTCTTGTCTATGAGTACATGGCCAACACTGGTCTTGATGCTTTTCTATTCGGTTAG 1284 0.4019 MYLSPNNTTFLLILISISMLMNHSNCIPTYNYHVCRDPILENASNSDIFQSELTSLLEILSLAASSKSFYNASISKRLYGLFLCRGDVSAKTCKKCTGIASQEIKSKCVWNSSGVIWYDECMVRYSKENFFGVAKTSPLAFVWNTNDKNRTSPSETHLNAQALMYPLIQDASSRKRRFKLGKSTVCDGSERYGLAQCTRDINKSSCISCLTHLMNKSGQCCQHKVGWRLLAPSCYIRYEKDIFYGDTTGPLISPNTQKPVLPTKDNGKRVQKLLIFHMIIPITSCLLFYLIWSSTQLRKGPQQGEGLTDVIQGMNVTHEDNKGEVQYFSLSTIKVATNSFSDDNKLGEGGFGPVFKGKLSNGKEIAVKRLSFKSRQGIEEFKNEMTLIAKLQHKNLVRILGCCIDRNEKLLVYEYMANTGLDAFLFG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151662g00002 427 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Stsc151662g00002 427 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 307 415 - -
Stsc151662g00002 427 ProSiteProfiles Protein kinase domain profile. 340 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151662g00002 427 Pfam Salt stress response/antifungal 41 127 IPR002902 -
Stsc151662g00002 427 Pfam Salt stress response/antifungal 148 240 IPR002902 -
Stsc151662g00002 427 Pfam Protein tyrosine and serine/threonine kinase 343 425 IPR001245 GO:0004672|GO:0006468
Stsc151662g00002 427 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Stsc151662g00002 427 Gene3D Phosphorylase Kinase; domain 1 314 415 - -
Stsc151662g00002 427 SUPERFAMILY Protein kinase-like (PK-like) 322 426 IPR011009 -
Stsc151662g00002 427 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 115 426 - -
Stsc151662g00002 427 Gene3D - 139 243 IPR038408 -
Stsc151662g00002 427 Gene3D - 28 130 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151662g00002 Stsc-Chr151662 5471 9200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151662g00002 12 426 Receptor kinase-like Gene Family AT4G05200 36.427 1.32e-83 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151662g00002 Stress-antifung 9.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151662g00002 - - aip:107640338 571.237