Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151661g00001 ATGTATACACAAAATAATAAGTGTAACAACACATTCTCTCAGGCAAATAATGACGATTACTCCCTCTCCCATGTTCATCACATGATAACGCCAAAGGGAATGCAGTCTTCAAGCAATGGAGCATCTCATCAAATGAAAATAAACAACTCGCCAGAGAATCATTATCAATGTCAATTATTCATGACGGTGAACTCAGAAGCGACAAGCATGAACAGCAGCAGCGGGTGCAGCACTCCTACTTCGATGGCGAGTTGCGAGACTACCAGTCAGCCAATGAACAACACGACTTTGCAGAAGAGCGTGAGCAGCCAATCGCTGATTAGGACCGGTGGGGTTCCCCAAAACCATAAGCAGTTATATCACTTCTCTGCTCTATTCTCTGAGTTATTTAATTCTGATGACATTCACGTTCGTAGGGTTTACAGCACCGGTGATCTTCAGGAAGAAAGTTCACTTTTAAGTGAAAGTAGTATGATCATAGAAGCAATGAGCAGAGCCAGCCCATATAGCCCTGAGGAGAAAAAGATGAGGATTGAGAGATATAGAACCAAAAGAAACCAGAGGAACTTCAACAAGAAAATCAAGTATGCTTGTAGGAAAACATTGGCGGATAGCAGGCCAAGAATCAGAGGAAGATTTGCAAGGAATGATGAGATTGTGAGAAACCCTCCATCACTTGAATGGTGCCAATTTGGTGGAGCTAATAATGGGGAGGAACAAGATGAAGAAGATGAGAATTGGGCCAATATATTTGATTCCTTAGACCCTGCAAATCTTTCTGCTCATCATCATCATCAAGAACAACAAGAAGATACTTCCCCTTTCGGTGTATTCTACTCTAATATTTGA 849 0.417 MYTQNNKCNNTFSQANNDDYSLSHVHHMITPKGMQSSSNGASHQMKINNSPENHYQCQLFMTVNSEATSMNSSSGCSTPTSMASCETTSQPMNNTTLQKSVSSQSLIRTGGVPQNHKQLYHFSALFSELFNSDDIHVRRVYSTGDLQEESSLLSESSMIIEAMSRASPYSPEEKKMRIERYRTKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIVRNPPSLEWCQFGGANNGEEQDEEDENWANIFDSLDPANLSAHHHHQEQQEDTSPFGVFYSNI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151661g00001 282 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
Stsc151661g00001 282 Pfam CCT motif 176 216 IPR010402 GO:0005515
Stsc151661g00001 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 46 247 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151661g00001 Stsc-Chr151661 7048 9455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151661g00001 165 215 C2C2-CO-like Transcription Factor Family AT5G24930 52.941 1.19e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc151661g00001 CCT 1.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151661g00001 - - aprc:113859774 214.157