Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151659g00002 ATGTCAATGGAGGAGAGAGAGACGCAAGTTTACTTGGCCAAGCTTGCTGAACAGGCTGAGAGATATGAAGAAATGGTTGAATGTATGAAGAACGTAGCAAAACTTGATCTTGAACTAACTGTGGAAGAGAGGAACCTCCTGTCAGTGGGATACAAAAATGTCATTGGTGCAAGAAGAGCCTCTTGGCGCATCATGTCCTCAATCGAGCAGAAGGAAGAGGCTAAGGGTAATGAGCACAATGTTAACCAGATCAAGAACTATTGTCAAAAGGTTGAGGAGGAGCTCTCAAAGATTTGCAATGACATTCTCACAATTATAGACCAGCATTTGATTCCGTCTTCCACCTCAGCTGAAGCTAAAGTTTTTTACTACAAGATGAAAGGTGATTATTTTCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAAGAAAGAGGCAGCTGACAAATCACTCAAAGGATATGAAGATGCTTCAGCGATTGCAAACACAGATCTGCCATCAACGCATCCAATCCGTCTAGGACTTGCGCTCAACTTTTCGGTGTTTTATTATGAGATAATGAATTCTCCTGAAAGGGCTTGCCACTTGGCAAAACAAGCTTTTGACGAGGCAATTGCAGAATTGGACACATTGAGCGAAGAATCATACAAGGACAGCACTTTGATCATGCAGTTGTTAAGAGACAACCTGACTCTTTGGACGTCCGACCTACCTGAGGATGGCGGTGACGATAACATAAAAGCTGAAGAAGCCAAACCAGCTGAGACCGAGCATTGA 777 0.4311 MSMEERETQVYLAKLAEQAERYEEMVECMKNVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEEAKGNEHNVNQIKNYCQKVEEELSKICNDILTIIDQHLIPSSTSAEAKVFYYKMKGDYFRYLAEFKTDQEKKEAADKSLKGYEDASAIANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDDNIKAEEAKPAETEH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151659g00002 258 Coils Coil 194 214 - -
Stsc151659g00002 258 Gene3D - 1 247 IPR036815 -
Stsc151659g00002 258 MobiDBLite consensus disorder prediction 240 258 - -
Stsc151659g00002 258 ProSitePatterns 14-3-3 proteins signature 1. 44 54 IPR023409 -
Stsc151659g00002 258 MobiDBLite consensus disorder prediction 237 258 - -
Stsc151659g00002 258 FunFam 14-3-3 protein epsilon 3 248 - -
Stsc151659g00002 258 Coils Coil 12 32 - -
Stsc151659g00002 258 ProSitePatterns 14-3-3 proteins signature 2. 216 235 IPR023409 -
Stsc151659g00002 258 SMART 1433_4 6 248 IPR023410 -
Stsc151659g00002 258 Pfam 14-3-3 protein 12 234 IPR023410 -
Stsc151659g00002 258 PANTHER 14-3-3 PROTEIN 6 236 IPR000308 -
Stsc151659g00002 258 PIRSF 14-3-3 1 246 IPR000308 -
Stsc151659g00002 258 SUPERFAMILY 14-3-3 protein 3 236 IPR036815 -
Stsc151659g00002 258 PRINTS 14-3-3 protein zeta signature 153 179 IPR000308 -
Stsc151659g00002 258 PRINTS 14-3-3 protein zeta signature 180 206 IPR000308 -
Stsc151659g00002 258 PRINTS 14-3-3 protein zeta signature 118 140 IPR000308 -
Stsc151659g00002 258 PRINTS 14-3-3 protein zeta signature 87 111 IPR000308 -
Stsc151659g00002 258 PRINTS 14-3-3 protein zeta signature 207 236 IPR000308 -
Stsc151659g00002 258 PRINTS 14-3-3 protein zeta signature 38 67 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151659g00002 Stsc-Chr151659 19886 22954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151659g00002 2 255 14-3-3 family AT1G26480 83.012 4.83e-160 443