Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151658g00001 ATGAGTCATGAGGAGGATTGGGATCTCTTTGCCATAGTTAGAAGCTGCAAAGCTGCCAACAACACTGCACAAACTCCACAAGAGACAAGTAGCAGTAGTAATAGCTTCATGTCTTCTTCTTCTACTACTTGCTTGGCCACTACAGAACAAAATGATGGCCCATTTTCTTCCAACAATTTTGCTCAACCCTCCTGGACCAATGGTTTCCAAGAGTTAAACCAATTGCTCAATACCTTTAACCCCACCATCACCACCGCCACTACCACTAGTGCCCATGGCATCAATCCTAATAATAATCCTCACCCTCCTTTTCCTCATTTCACAGCTCCATCCAACATTGGAGCTTCCACTTCTGGTTTTGATGACAGATTCCACCAACAACAACAAAAACAGTATAATCAACTACAAGTTCAAGTTCCCCAAACTAGTACTACTGCTCTGGCCTTATTACCAAGCTCAGAATCACAATCACAAATACAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAGAAATTGGTATGCCATGTAACCGCAGATAACCTCTCATCAGATTTGTGGGCATGGCGTAAATATGGTCAAAAACCCATCAAAGGTTCCCCATATCCAAGAAACTACTACAGATGCAGCAGCTGCAAGGGTTGTGCAGCAAGAAAGCAAGTAGAGAGAAGCTTATCAGACCCCACCATGTTCGTTGTCACTTACACCGGAGAACACAAGCACGCTAAACCGGCACACCGGAACTCACTCGCCGGAAGTACCCGTAAACCAACCTCCACAACTTCTCGTTTACCTGAGATCCAAGAAAGCACTGATACTACTAATAAGAATCCTGATGAAAAGTCTCATGAGAACAGCACCACAACGAAATACCAGAACGCTAAACCAGAACAACCGGAAATTATTGAACAAGAAATGGAGGATTCCTCCTCTGAAGATGACAGTGGTGATGATGGTGGTGTCTTGATTCCCAACAACACTGCCACAATGTCGGATGCAGTGTTCTTGGGAAGCAGCGGCACGGCTGCTTCAATGTGGCACTACGACGGTGGATTTGAGAACAGTTCCGATCCGGACGGTTCAACTAATCAGAACTAA 1101 0.446 MSHEEDWDLFAIVRSCKAANNTAQTPQETSSSSNSFMSSSSTTCLATTEQNDGPFSSNNFAQPSWTNGFQELNQLLNTFNPTITTATTTSAHGINPNNNPHPPFPHFTAPSNIGASTSGFDDRFHQQQQKQYNQLQVQVPQTSTTALALLPSSESQSQIQTPRSRKRKSQQKKLVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSLSDPTMFVVTYTGEHKHAKPAHRNSLAGSTRKPTSTTSRLPEIQESTDTTNKNPDEKSHENSTTTKYQNAKPEQPEIIEQEMEDSSSEDDSGDDGGVLIPNNTATMSDAVFLGSSGTAASMWHYDGGFENSSDPDGSTNQN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151658g00001 366 MobiDBLite consensus disorder prediction 344 366 - -
Stsc151658g00001 366 SUPERFAMILY WRKY DNA-binding domain 179 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151658g00001 366 Pfam WRKY DNA -binding domain 186 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151658g00001 366 Gene3D WRKY domain 167 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151658g00001 366 MobiDBLite consensus disorder prediction 252 273 - -
Stsc151658g00001 366 SMART WRKY_cls 184 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151658g00001 366 FunFam WRKY transcription factor 22 167 238 - -
Stsc151658g00001 366 MobiDBLite consensus disorder prediction 20 44 - -
Stsc151658g00001 366 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 316 IPR044810 GO:0003700
Stsc151658g00001 366 MobiDBLite consensus disorder prediction 149 173 - -
Stsc151658g00001 366 MobiDBLite consensus disorder prediction 238 327 - -
Stsc151658g00001 366 MobiDBLite consensus disorder prediction 149 164 - -
Stsc151658g00001 366 ProSiteProfiles WRKY domain profile. 179 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151658g00001 Stsc-Chr151658 3232 4772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151658g00001 163 267 WRKY Transcription Factor Family AT5G52830 74.286 2.21e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151658g00001 WRKY 8.4e-25 CL0274