Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151643g00001 ATGTCAATGATTAAAACAACTCTCTCCTCCATCCTCCTCAAGTTCTTATCATCATGGTTTCCCCTTAGTCACCTTCACATCGTTGTCATCACCATCATGTTCTTGGTGCATATCCAAATCAAACAGTCTTTGTCTTCAATAATGGATCCAAACTTCACAGCTTGCGAGCCCGTGAACTGTGGTCAGGGCCCAAACATAAGCTACCCTTTCTACATCACAGGCAAACAAAAACCCTTGTGTGGCTACCCAGGTTTTGACCTCACTTGTGCCACAAATGGCTTCCCAATTCTTGATCTCATCAACAACCAATACATCATCCAACAAATCTTCTACAACAACAACTCAATTCGAGTTTCCAACCCCGCTTTTTCACCGCCAAAGAATTCTCATCAGTGTATTCTTCCCACACAGAATCTCACAGTTGGCAAGTACAGGTTCCGCCTTGCTCCCAAACAGAGGAAGGTGTTCTTGTTCTATGGTTGCGACTTAACGAAGCTTCCAGAAGAGATGAAAGAGCGTAGAATCGGGTGTTCTGTTGATGGAAACGGAACGAGTAATTCATCGGTTGTGGGGTTGTATGAGGAAGACACGAATTTGAGGAGGTTAGCGGAAGAGAAGTGCAGAGGTGGGTGGGTGAATACAACAGTGGGTGATGATGATCTGGGAGGGAATGTTCGAGAAGGTCTTTTGAAAGGGTTTGTGTTGAATTGGAATGCAAGTAATTGCAGCACGTGCTCGAATAGTGGGGGAAGGTGCGGGTTTGATACAAGCTCAGCTGTATACGCTTTTAGGTGCTTCTGCCCTGATAGAGTTCATGCAGCGCAGTGTACTACTCCGCCGCCACTACCACCACCTGGACCACGACAACCAGACGACAACGATGAAGGCGACGATGACAGCAGCGACGACAGCGACGACAACGGCAACAGCGACGACGCCAATGACAGTGGCGATGACGACGATAGCGGCAGCATGGTGACGATGACAACAGAAAAGAAGAAGACGCCGATAATAGAGAAGAAGATAGCAGCGACAATAGGGACGGCGAGGAGGAAGACGAAAAAGAGGTGTAACACAGGAAGATGGAGTACATTTGAGTACATTTGA 1107 0.4724 MSMIKTTLSSILLKFLSSWFPLSHLHIVVITIMFLVHIQIKQSLSSIMDPNFTACEPVNCGQGPNISYPFYITGKQKPLCGYPGFDLTCATNGFPILDLINNQYIIQQIFYNNNSIRVSNPAFSPPKNSHQCILPTQNLTVGKYRFRLAPKQRKVFLFYGCDLTKLPEEMKERRIGCSVDGNGTSNSSVVGLYEEDTNLRRLAEEKCRGGWVNTTVGDDDLGGNVREGLLKGFVLNWNASNCSTCSNSGGRCGFDTSSAVYAFRCFCPDRVHAAQCTTPPPLPPPGPRQPDDNDEGDDDSSDDSDDNGNSDDANDSGDDDDSGSMVTMTTEKKKTPIIEKKIAATIGTARRKTKKRCNTGRWSTFEYI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151643g00001 368 Pfam Wall-associated receptor kinase C-terminal 217 269 IPR032872 -
Stsc151643g00001 368 MobiDBLite consensus disorder prediction 277 337 - -
Stsc151643g00001 368 PANTHER OS01G0690200 PROTEIN 26 276 - -
Stsc151643g00001 368 MobiDBLite consensus disorder prediction 292 319 - -
Stsc151643g00001 368 Pfam Wall-associated receptor kinase galacturonan-binding 55 119 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151643g00001 Stsc-Chr151643 367 2153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151643g00001 55 266 C3H Transcription Factor Family AT2G46495 23.810 1.57e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151643g00001 - - aip:107643858 397.512