Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151626g00002 ATGATGGTCAAGGAAGATGAACCAACTTTGACAGCAGCCAAGGAACAAGCAGAGGAAGAGATGATGAATGAAGGAAAGAGCAATGACGAAAGCGATCATGAGAATAATAATCCTCAAGAGTGGTTGAACCTGAGCTTAGGAGGCAATTCACTGTCAACAGCAGGGGACACTGATTCATCATCACAAACAAGACCAGTTGTTGCAACAAAAGTTTTCTCGTGCAACTTCTGCATGAGGAAGTTCTATAGCTCACAAGCATTAGGGGGTCATCAGAACGCGCACAAAAGGGAAAGAGGTGCTGCAAGAAGATATCACTCTCAGAGGACCATGGCCATGATGGGAATGGGATTTCCCATGATGAACACTCCCATGATGCGATCACTCGGTGTTCAGCCTCATTCACTGGTGCAAAAGCCATGCAGAGGTGGTGGAACTGGAAATGGAGGAGCCATGGTGGCACCAACCTTTCATGATGCATATGCATCATCAGGTCTTGGAATGGCATGGACACCTTTCATGGCTGAGGAGCCAGCTGATATGGTTTGGCCCGGCAGCTTTCGCTTGGTTCCGCAACAACCGGAGCCGCAGCAGGAACCACTGAAACTTGATTTAGACCTCAGACTCTGA 627 0.4817 MMVKEDEPTLTAAKEQAEEEMMNEGKSNDESDHENNNPQEWLNLSLGGNSLSTAGDTDSSSQTRPVVATKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYHSQRTMAMMGMGFPMMNTPMMRSLGVQPHSLVQKPCRGGGTGNGGAMVAPTFHDAYASSGLGMAWTPFMAEEPADMVWPGSFRLVPQQPEPQQEPLKLDLDLRL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151626g00002 208 MobiDBLite consensus disorder prediction 37 63 - -
Stsc151626g00002 208 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Stsc151626g00002 208 MobiDBLite consensus disorder prediction 1 63 - -
Stsc151626g00002 208 MobiDBLite consensus disorder prediction 1 36 - -
Stsc151626g00002 208 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Stsc151626g00002 208 PANTHER ZINC FINGER PROTEIN 4-LIKE 3 208 - -
Stsc151626g00002 208 Gene3D Classic Zinc Finger 55 115 - -
Stsc151626g00002 208 SUPERFAMILY beta-beta-alpha zinc fingers 69 98 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151626g00002 Stsc-Chr151626 8600 9226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151626g00002 2 194 C2H2 Transcription Factor Family AT1G24625 33.171 3.19e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151626g00002 - - gmx:100811125 236.498