Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151619g00006 ATGGCTTCTTCCCCACAATCAATGTTTGATTATGACTTCCCATTGCCTAACAGAACCGTTTTCACCATCTTATCCTCACTATATCTCAACAAGGCTAAGAGATTACCTCCTGGCTCAACAGGGTTGCCAATCTTGGGGAGCCTTCACAAGTTGGGAGCTAATCCTCATCGTGATCTGCACAAACTAGCACAAAAACATGGACCCGTCATGTACCTGCGCCTAGGTTTTGTGCCCACCATTGTTGTTTCTTCATTCCAAGCTGCTGAATTGTTCCTCAAGACACATGACCATGTCTTTGCTAGCAGACCACCTGAAGAAGCTGCAAAGTACATCTCTTGGGAGCAGAGAAACTTGAGTTTTGCTGAATATGGCCCTTACTGGCGCAACATTCGCAAGATGTGCACATTGGAATTACTGAGCCCAACCAAAATCAACTCCTTCAAAACCATGAGGCAAGAAGAGATTGTCCTATTCATCAAGCTTGTGAGAGAAGCCGCCAGTGATGGAGTATTGGAGTTGTTGTTGATCTTAGTGCCAAGGTTGTAG 546 0.4524 MASSPQSMFDYDFPLPNRTVFTILSSLYLNKAKRLPPGSTGLPILGSLHKLGANPHRDLHKLAQKHGPVMYLRLGFVPTIVVSSFQAAELFLKTHDHVFASRPPEEAAKYISWEQRNLSFAEYGPYWRNIRKMCTLELLSPTKINSFKTMRQEEIVLFIKLVREAASDGVLELLLILVPRL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151619g00006 181 Pfam Cytochrome P450 36 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151619g00006 181 Gene3D Cytochrome P450 29 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151619g00006 181 PANTHER CYTOCHROME P450 93A3-LIKE 21 169 - -
Stsc151619g00006 181 SUPERFAMILY Cytochrome P450 30 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151619g00006 Stsc-Chr151619 28799 29557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151619g00006 34 171 Cytochrome P450 AT3G26190 44.928 4.77e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151619g00006 K20562 - gmx:100809526 243.047