Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151614g00001 ATGGCTTCTAGTTGGGAGAGAAGAAGGGAGGTTCTTCAACAAAAGTTGAATCAACTCAGAGATGTTACAAATTCTAGTGCTGTGAACAAAGCTTCAATTATTGTGGATGCATCTAGATACATAGAGGAATTGAAGCAAAAAGTGGAAGGACTAAATTCAGAGCTTGTAACCTCTGAAAATTCTTCAACCTCTCAAATTGATGATGATGATGATGATGAACTACCTATGGTGACTGTGGGAACCCTAGAAAAGGGTTTTCACATTAATGTGTATTCAGAGAAGAATTGCCCTGGTATGTTGGTCTCAATACTAAAAGCATTTGAAGAACTTGGACTTGATGTTCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTCAAGCAGTGGGTGGAGAA 399 0.3885 MASSWERRREVLQQKLNQLRDVTNSSAVNKASIIVDASRYIEELKQKVEGLNSELVTSENSSTSQIDDDDDDELPMVTVGTLEKGFHINVYSEKNCPGMLVSILKAFEELGLDVLDARVSCEDTFQLQAVGGE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151614g00001 133 Coils Coil 34 61 - -
Stsc151614g00001 133 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 130 - -
Stsc151614g00001 133 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 55 IPR036638 GO:0046983
Stsc151614g00001 133 Coils Coil 2 22 - -
Stsc151614g00001 133 MobiDBLite consensus disorder prediction 54 74 - -
Stsc151614g00001 133 Gene3D - 5 68 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151614g00001 Stsc-Chr151614 1419 2166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151614g00001 7 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 34.783 4.82e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151614g00001 - - ccaj:109816195 182.57