Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151613g00001 ATGGCTGGTCGAGACGTCTCTACCAAAGGGAGCTTCTTCCTTGAAGTGAACCCTGACTTGGTAAACCCTTTCCTTCCATATATGCTTGGATGTGAAGCCATCGATGGTGGTTCTGATCATGTTGAGGGGATTCAAACTTCTCTATATTTTCCACTGAAAGACAATTTTAAGACGGCAAAATCATCCCCTGATCTCTCCCATTTTAACGAATGTAGTTTAAAGCTAGCATGTGATGAGATTCCAATTAAGGCTTTTTATATGGGGAACCTGAGTTGCGGTCAAGCTCCACGTTATGTGCATTTGAAGGGTTTTCCAGACGTGTTTTTACCTTCCATCCAGACATGCTTATATGATGATTGCTATGAAACTAAGGGATTCATGGAGTTTGACATAAACTTCTATCAAGTTGGGGAGGTAATGAAAATAGACGAACGGGATAAGCATGTGCATGGTATATTTGCTTTTTCCCCTGTTACCAGTAGAAGTGGTGCTGATCCACCTCAACGTCAAATTCCATATAGTCTAGAGGAGGGAAGGGCGGTAATATATATTCATGTGTCAAGGTGCTATCAAGCTTCCAAGCACGTCACTACTCATTGGTTTGCAGTTCGAGCATTTCCTTCTAAGCTTCCATATGTTAAGGTGTATAGCACAAGGGGAAGAGGTGTTATGATGAAGCTTATATGGAGGCAATGCAGGTCGAATGAGCTAATTTTGACCCATGGATGGAAGGATTTTTTGAGGTCGAACCAGCTCAGGCATGGAAGTGCTGTAAAGTTCAGTGTTTTGTCAACTGACGAGACAACTATGTTTATCAACATTATAACTCAGTAG 834 0.4173 MAGRDVSTKGSFFLEVNPDLVNPFLPYMLGCEAIDGGSDHVEGIQTSLYFPLKDNFKTAKSSPDLSHFNECSLKLACDEIPIKAFYMGNLSCGQAPRYVHLKGFPDVFLPSIQTCLYDDCYETKGFMEFDINFYQVGEVMKIDERDKHVHGIFAFSPVTSRSGADPPQRQIPYSLEEGRAVIYIHVSRCYQASKHVTTHWFAVRAFPSKLPYVKVYSTRGRGVMMKLIWRQCRSNELILTHGWKDFLRSNQLRHGSAVKFSVLSTDETTMFINIITQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151613g00001 277 SUPERFAMILY DNA-binding pseudobarrel domain 207 274 IPR015300 -
Stsc151613g00001 277 Gene3D - 179 277 IPR015300 -
Stsc151613g00001 277 Pfam B3 DNA binding domain 212 275 IPR003340 GO:0003677
Stsc151613g00001 277 ProSiteProfiles B3 DNA-binding domain profile. 213 277 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151613g00001 Stsc-Chr151613 2488 3461 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Stsc151613g00001 B3 1.3e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151613g00001 - K01463 adu:127740618 72.0182