Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151612g00002 ATGTTCCATCTATCCACTGAATCTGATAGCATCTTGCCAGGGCAGAGACTATCAGGAAACCAAACTCTAGTTTCCTATGGAGAATACTTTGAAATGGGTTTCTTCTCTCCATCATCAAGTAACAACTACTCTCGCAATTATTACATAGGCATATGGTATAAAGGGTTGCCACAAAGAACAGTTGTTTGGGTAGCCAACAGGGATCATCCTGTGTCTGATCCATATTCTTCATGGTTAGAACTTGATAAACATGGCAATCTATCTCTGTATACCTCCCATGGTCATGCAGTTTGGTCAACAAACTCTTACTTTATTTTGGGTCCTTCGGATTCCACAGCTGCTTATCTCCGGGAAGATGGAAACTTTATTATAAGCACCTCATTTGACGAATATGGATGGCAAAGCTTCGATTACCCAACTGATACATGGCTTCCTAATGCGCATTGGGGATATGACAATCAAAGAGGTATTAAAAGGGTTCTGAAATCTTGGCTAGCTGCAAGTAATCCAGCAACTGGCCACTTCTCAGCTGAGGTAACTAGAGCTTCTGAATATTTACTTGAGGTTCAGTTGTTACTAAATGATAGTTTTATTGAGTCTAAATTCTGCACTGAACCGTTCACTGGAAACATAGATTCTTCATCCGAATACTTGTATTTTGTGCTCTCATGTGACCATGATATCTCATTATGTCGTATTAGATATGTGTTAGATGTATCTGGAAAGCTCAAACTTTTAGGGTTGTTAGACGATACGAAAGAATGGGTTAACATCCTCATGGACCACCAAAAATGTGACTTTCACGGTGGAAATGAGGATACAAGAGTGAATGCCAAACACAGTGGAAATGAGGATACAAGAGTGAATGCCAAACACAGTGCAAGGAAGAATGCTACGTGTGTGGTTGTGGCAGCAGCAATTTGGGTTGCTAGTGTGTTGGTTGCCATTGCCATTTTGCTCATAATGCTGTGGAAGAGAGGCACTACCACTTCATCTAATAAGGCAATGGACGGAGATACATTGAAGTTGTACAAGTACAGAGATTTGAGAAAAGCAACTAGAAACTTCAAACACAAGCTTGGAAAGGGTGGTTTCAGCACTGTTTACAAAGGGGAATTCCCTTATTCCGTTTTCGTAGCTGTCAAGGAACTTCAAGGACACTTTCAAGAAGAGAAACAACTTAGAGCAGAACTCAACACGGTAGGGCTGATTCAGCACAAGAATCTTGTTCGCTTACTTGGATTTTGCTTAGAAGGTTCCAAGAGATTCATAATTTATGACTATATGGAAAATGGTTCTCTAGAATCTCATTTATTTAAGGAGGATTCCAATGTCTTAGAATGGGGAACTAGATACAATATCGCTCTTGGGACTGCCAAGGGTTTAGCTTATCTACACGAGCATTGTAGAGACTGCATCATTCATTGTGACATCAAGCCGGAGAACATTTTGTTGGATGCTGATTTCAACCCTCAAGTTGCGGATTTTGGCTTGGCAAAGCTTCTTGGCCGAGACTTCAGTCGGGTTCATACAACGATGAGAGGAACAAGAGGCTATCTAGCACCAGAGTGGTTCTCTGGAGTCCCAGTCACAGCAAAAGTTGATGTGTATAGCTATGGTCAAGTCCTGTTTGAGATCATTTCAGGTAGAAGGAACATGGATCTAGCAAATGATGATCTAGCTAGTTATTTCCCAGCAATTGTTTTCAATACATTGAACAATGGGGAGGATGTTCTGGCATTGGTAGATTCCAAACTGCAAGGCGAATTCAGTGCAGAGGAGGTTACTAGAGCATGCAAGGTGGCTTGTTGGTGCATTCAAGATGATGAGAATTATAGACCAACAATGAAAGAGATTGTTCAAGCTTTGGAAGGACATCTTGATGTAGGTATTCCTCTGATTCCACGGTTTTTCCTGTCACTAGCAGAACCTTCTGTCCGAAAAGGTGAGGCGAAGGAAAGCGAGGATTATAGCACATCAAGCACACTACCTTCAAGTTTCATCTTTCAACCATCAGCTGAGGCAGTTCAAGATGAACAATGA 2043 0.4131 MFHLSTESDSILPGQRLSGNQTLVSYGEYFEMGFFSPSSSNNYSRNYYIGIWYKGLPQRTVVWVANRDHPVSDPYSSWLELDKHGNLSLYTSHGHAVWSTNSYFILGPSDSTAAYLREDGNFIISTSFDEYGWQSFDYPTDTWLPNAHWGYDNQRGIKRVLKSWLAASNPATGHFSAEVTRASEYLLEVQLLLNDSFIESKFCTEPFTGNIDSSSEYLYFVLSCDHDISLCRIRYVLDVSGKLKLLGLLDDTKEWVNILMDHQKCDFHGGNEDTRVNAKHSGNEDTRVNAKHSARKNATCVVVAAAIWVASVLVAIAILLIMLWKRGTTTSSNKAMDGDTLKLYKYRDLRKATRNFKHKLGKGGFSTVYKGEFPYSVFVAVKELQGHFQEEKQLRAELNTVGLIQHKNLVRLLGFCLEGSKRFIIYDYMENGSLESHLFKEDSNVLEWGTRYNIALGTAKGLAYLHEHCRDCIIHCDIKPENILLDADFNPQVADFGLAKLLGRDFSRVHTTMRGTRGYLAPEWFSGVPVTAKVDVYSYGQVLFEIISGRRNMDLANDDLASYFPAIVFNTLNNGEDVLALVDSKLQGEFSAEEVTRACKVACWCIQDDENYRPTMKEIVQALEGHLDVGIPLIPRFFLSLAEPSVRKGEAKESEDYSTSSTLPSSFIFQPSAEAVQDEQ 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151612g00002 680 Gene3D Phosphorylase Kinase; domain 1 321 428 - -
Stsc151612g00002 680 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Stsc151612g00002 680 PANTHER OS07G0415500 PROTEIN 7 180 - -
Stsc151612g00002 680 MobiDBLite consensus disorder prediction 650 680 - -
Stsc151612g00002 680 Pfam D-mannose binding lectin 60 164 IPR001480 -
Stsc151612g00002 680 ProSiteProfiles Protein kinase domain profile. 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151612g00002 680 SMART blect_4 14 139 IPR001480 -
Stsc151612g00002 680 ProSiteProfiles Bulb-type lectin domain profile. 8 137 IPR001480 -
Stsc151612g00002 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Stsc151612g00002 680 CDD B_lectin 17 139 IPR001480 -
Stsc151612g00002 680 CDD STKc_IRAK 360 625 - -
Stsc151612g00002 680 SUPERFAMILY alpha-D-mannose-specific plant lectins 46 141 IPR036426 -
Stsc151612g00002 680 MobiDBLite consensus disorder prediction 656 680 - -
Stsc151612g00002 680 SMART serkin_6 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151612g00002 680 Gene3D - 2 136 IPR036426 -
Stsc151612g00002 680 SUPERFAMILY Protein kinase-like (PK-like) 336 623 IPR011009 -
Stsc151612g00002 680 FunFam S-receptor-like serine/threonine-protein kinase 325 428 - -
Stsc151612g00002 680 FunFam Serine/threonine-protein kinase 429 631 - -
Stsc151612g00002 680 Gene3D Transferase(Phosphotransferase) domain 1 429 629 - -
Stsc151612g00002 680 Pfam Protein kinase domain 356 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151612g00002 Stsc-Chr151612 7477 10579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151612g00002 344 632 Receptor kinase-like Gene Family AT5G20050 43.137 2.93e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc151612g00002 Pkinase 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151612g00002 - - ahf:112737678 1003.43