Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151610g00002 ATGGAAAACCACCAAAACCACAACCCGACCCGTGACCCAGACCTAGCAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGCAAAACCAACACCAACACCATCAGGTTTGGGGCACGTGGGAGGAGCTCTTGCTAGCCAGCGCCGTCAACCGCCATGGCTTCAAGGACTGGGACACCGTCGCCATGGAGGTGCAGTCGCGGACCTCCGTACCCAACCTACAAGCCACCGCGCGCCACTGCGAGCAGAAATTCCACGATCTCAACCTCCGATTCGCCGACCAATGTAACGAGGCCATCACGCCGCTCCTCCAGAACGGCGTCGCCGCCGGTGATAACTCCGATCACGTCCCGTGGCTCGACGAATTGCGGAAGCTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAACGCTCCGACGTTTCTATCCTGTCGTTGCAGTTGAAGGTGAAGAAGTTGGAGGAGGAGAGAGAGAAAGAGAATGACGGAAAAGTCGATGAAAAAGCAGATCTGGCGGTTTTCGGCGAGGAGCGGCCGGGGAACGACGGAACCGGCAGAGAGAGGGAAGTTCCTGAGCCGACCGGTTCCGAACCGGAGATTCGCCGGCTCGACGAGAGCACCACGAATACTGATAAGCTTTTGCCAACTGGTGACGAGTCGGACCGGGAGAATCAGTCGGTTAATGAGTCTAACTCGACCGGTTCGCGGTTCGAGGGAGGGAAAACCGGACACGGTGATGGTGATGGGAAGATAGGGGTAGGAGAGGTTCCGGTTCATTCCGGTCCGAAAGAACCGGATCCGGTTGGAACGAAGCGGAGGCCGGTTGGGGAGGAATCGAATAACGGTAGCTACGATACTGAGGTTAAAGTTCCAACATGCGAGTCACAGCCGCCAAGTGAGGAGAGGAAGGCGGAGGGCAGTGACTCGTCCGAGTTGCGTGGTGACTCGGTTGGGCACTCGGGGGAAGGGGGACGGGGGACGAGGGAGAGCAGCGAGGTTCAGAGCTCTGCTAGCTTGACAAGGAAGAGGAAGACGCGGCGGAGGAAGGAGGCTTCCGGTGGTAGCGGTGGCGGCGAGGTGGCCCCGGAGAGTGACGAGGCGATGGTGAAATCGGAGCCGTTGATTAGCGTGCTGGAGATGATCAAGGGACATGAACACAGCTCATTGTTCGAGCGCCGTCTCGAAAGTCAGGAATCGGAAATATACAAAAACATTGTAAGACAGCACGTGGATTTGGAAACCATACAATTGAGACTCCAGAAGGGCCACTATTCCTCTTGCACAAACTCTTTCTTCCGTGACCTTCTCCTCCTCTTTACCAATGCCACCGTCTTCTTTCCCAGAGACTCCCCGGAATCCACGGCTGCGCAGCAGCTGCGGCAGCTCGTCATGGCGGAGATGAAAAACCAAGGCCAAGCACAATCTGACCCTACCCCGCAGAAGACGGATTCCAACCCTCCAAACGCACCACAAGTCAAACCAGAATCCCTCCTTTCCAAGCACAAAGCCTCTGCTCCAATATTGGTATGCCGAAAACGCAGTTCAATGTCATCAAAACCTTCTTCAGTGAACTTCGGCCAAAAGGGGGATCAACCCATCACTGATAAGAAGGAAAAGCCATCTTCTGATGCAAAACCACCCTTGAAATCCTCTTCTTCCGAGACAGATGAGGAGGAGGCTCCCAAGGCCAAGGAAAAACCAGTCACTGGAGCCCGAAGCCTGAGAAGAAGCAACAAGAACCTCAGCAGCAACAGCAATTCTGGCAATAAGAAACTCACCTCTAACTCCACTCCGAAATCAGGGAATTTGGTGACCAAGGCTGCCCAGGCCTCGAAACCGGACAAGAGCAAAGCAGAGGGAGGGCAGGACAAGAAGAGGAATGCAGCGGCTGATTTCTTGAAACGAATAAAGCGAAACGCTCCGGTGGAGGCGCTGAAGAGTGGCAGTGGTGGTAGTGGTGGTGGAAGTAGTAGCAGCAGCAGGGGTGGTGCTGCAAGCGCGAAAGATCAGAAGAAAATTGTGAATAGTGGAAAGGGTGATAATAAAGGGAAAGAAAGGGCGTCAAGGCATAATAATAATAATAATGGTGGTGGAGGAGGATCAGGGGATAAAAGGAATAACAAGAACGTTGTTGAGAATAGCAAGAGGAGTGTAGGTAGGCCTCCAAAGAAAGCAGCAGAAAGCAATACAGCTTCTGCAAAGCGTGGGAGGGAAAATAGTGCTAGTGCTGCTAGTAAGGATAAGCGACCCAAGAAGCGTTCTAAGAAATGA 2262 0.5398 MENHQNHNPTRDPDLAEEEEKKKKKKQNQHQHHQVWGTWEELLLASAVNRHGFKDWDTVAMEVQSRTSVPNLQATARHCEQKFHDLNLRFADQCNEAITPLLQNGVAAGDNSDHVPWLDELRKLRVAELRREVQRSDVSILSLQLKVKKLEEEREKENDGKVDEKADLAVFGEERPGNDGTGREREVPEPTGSEPEIRRLDESTTNTDKLLPTGDESDRENQSVNESNSTGSRFEGGKTGHGDGDGKIGVGEVPVHSGPKEPDPVGTKRRPVGEESNNGSYDTEVKVPTCESQPPSEERKAEGSDSSELRGDSVGHSGEGGRGTRESSEVQSSASLTRKRKTRRRKEASGGSGGGEVAPESDEAMVKSEPLISVLEMIKGHEHSSLFERRLESQESEIYKNIVRQHVDLETIQLRLQKGHYSSCTNSFFRDLLLLFTNATVFFPRDSPESTAAQQLRQLVMAEMKNQGQAQSDPTPQKTDSNPPNAPQVKPESLLSKHKASAPILVCRKRSSMSSKPSSVNFGQKGDQPITDKKEKPSSDAKPPLKSSSSETDEEEAPKAKEKPVTGARSLRRSNKNLSSNSNSGNKKLTSNSTPKSGNLVTKAAQASKPDKSKAEGGQDKKRNAAADFLKRIKRNAPVEALKSGSGGSGGGSSSSSRGGAASAKDQKKIVNSGKGDNKGKERASRHNNNNNGGGGGSGDKRNNKNVVENSKRSVGRPPKKAAESNTASAKRGRENSASAASKDKRPKKRSKK 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 151 365 - -
Stsc151610g00002 753 Pfam Myb-like DNA-binding domain 34 68 IPR001005 -
Stsc151610g00002 753 Coils Coil 140 167 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 293 309 - -
Stsc151610g00002 753 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 22 753 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 1 34 - -
Stsc151610g00002 753 Pfam Bromodomain 374 454 IPR001487 GO:0005515
Stsc151610g00002 753 CDD SANT 36 69 IPR001005 -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 670 686 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 570 606 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 273 290 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 464 489 - -
Stsc151610g00002 753 SUPERFAMILY Homeodomain-like 30 69 IPR009057 -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 528 569 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 151 205 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 609 638 - -
Stsc151610g00002 753 ProSiteProfiles Bromodomain profile. 379 450 IPR001487 GO:0005515
Stsc151610g00002 753 SUPERFAMILY Bromodomain 371 469 IPR036427 GO:0005515
Stsc151610g00002 753 CDD Bromodomain 365 464 - -
Stsc151610g00002 753 Gene3D - 26 87 - -
Stsc151610g00002 753 Gene3D - 359 474 IPR036427 GO:0005515
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 464 753 - -
Stsc151610g00002 753 SMART bromo_6 136 469 IPR001487 GO:0005515
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 647 662 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 1 25 - -
Stsc151610g00002 753 MobiDBLite consensus disorder prediction 511 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151610g00002 Stsc-Chr151610 7858 13161 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc151610g00002 Bromodomain 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151610g00002 - - adu:107458545 1112.06