Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151601g00004 | ATGGGAAGGGGAAGAAGATTAAAAAAGCTACATCTTAGCAAGATTTACACTTTCACCTGTGGTAAAAAATCACTATTCAATGATGAACATTCTCGAATTGGAAGTGTTGGCTTTTCAAGGGTGGTGTTGGTGAATGAGTTCTCAGAGAACTTTAACAATACTTGTGAGAACAATAATAACAACAACTATGCAGATAATGTTGTGCGTTCTACAAAATACACGGTTGCAAATTTCCTACCAAAATCACTATTTGAGCAGTTTAGGAGAGTGGCGAACTTCTTTTTCTTGGTGACTGGTGTATTATCCTTTACCAAACTTGCACCTTATACAGCTGTGAGTGCTATCTTGCCCTTGATTGTTGTCATTACTGCCACAATGGTCAAAGAGGGTATCGAAGATATGCGTCGAAAAAAGCAGGATATTGAGGTAAACAATCGAATAATTGAAGTGCATAAAGGGGATGGAACTTTTGAACGTACTGAGTGGAAAAACCTAAAGGTGGGAAACATAGTGAGAGTTGAAAAGGATGAGTTCTTCCCTGCTGACCTACTACTTCTTTCATCAAGTTATGAGGATGCAGTATGTTATGTTGAGACCATGAACTTGGATGGAGAGACAAACTTGAAGTTGAAACAAGGCTTGGAAGTAACTTCTTCCTTACATGAGTACGACTTTAGTGATTTTAAAGCTTCTATCAAATGTGAAGACCCCAATGCAAACTTGTATTCATTTGTTGGAAGCATGGAGTTTAAGGAGCAAGTGCATGCACTTTCTCCCCAACAACTTCTCCTAAGAGATTCTAAACTCCGTAACACAGAATACATATTTGGAGCTGTCATCTTCACAGGGCATGACACAAAGGTTATCCAAAATTCAGTTTCTCCTCCTTCAAAACGAAGCAAGATTGAAAGGAAGATGGATAAAGTTATTTATGTCTTATTTTTCATCTTATTCCTAATGTCATTTGTTGGATCAGTTTTCTTTGGCATTACAACTAAAGAAGACTTGAAAAATAATGTGATGAAAAGATGGTATCTAAGACCAGATGATTCTACAATTTTCTTTGATCCTAAAAGAGCCCCTGCAGCTGCTTTCTTCCATTGTTTGACGGCCTTAATGTTATATAGCTTCTTTATTCCGATCTCGTTGTACGTATCCATAGAAGTTGTTAAAGTCCTTCAAAGCATTTTCATAAACCAAGATATTAATATGTACCATGAAGAAACAGACAAACCGGCCCATGCTGTTACTTCAAACTTAAATGAGGAACTTGGCCAAGTTCACACGATTCTTTCTGATAAAACTGGAACTCTTACTTGCAATTCAATGGAGTTCATCAAATGTTCCATTGCTGGAGTAGCTTACGGTCGTGGGGTCACAGAGGTTGAGAAGGCCATGAATAGAAGAAATGGATTAGAATTTGATGACATAATGAATTCTCCAGATAGAAAGGCACCCATCAAAGGTTTTAATTTTACAGACGAAAGAATAATGGACGGAAATTGGGTTAATGAACCTCATGCAAATGTTATTCGAAATTTTTTTCGCTTATTGGCAATTTGTCATACAGCTATACCAGAAGTTGATGAAGACACCGGAAAAGTCTCTTATGAGGCTGAATCTCCAGATGAAGCAGCATTCGTGATTGCAGCAAAAGAAGTTGGCTTTGAATTTTACAAAAGGACCCAAACAAGTTTATCAATATTTGAGTTGGATCCAGTTTCTCAACAAAAAGTTAAAAGGACATACTGCCTTCTCAATGTTTTAGAATTCAATAGCACAAGAAAGCGGATGTCTGTCATAGTGAAAGATGAAAGGGGAAGAATTTTGTTACTTTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGACTTGCTAACAATGGAAGAGAGTTTGAAGAGAACATCTTGGAACATGTACATGAATACGCTGACGCAGGTTTAAGGACATTACTACTAGCGTTCCGTGAACTTGATGAAGAAGAGTATAAGGAGTTTGATGCCAAATTTACCGAAGCAAAAAATTCAGTTTCAGAAGAGCGAGAAACAATGATTGAGGAAGTTTCAGATAATATTGAAAGGAATATGGTTCTACTTGGTGCCACTGCCATAGAAGACAAGCTCCAGCATGGGGTTCCAAATTGCATTGACAAGCTTTCCCAAGCAGGAATTAAGATTTGGGTTTTGACAGGGGATAAAATGGAAACTGCCATTAATATTGGTTTACTTAGAGAAGGAATGAAGCAAATTATAGTTCATTTGGATACTCCAGAAATTCGATCACTAGAGAAGGTTGGGGATAAGACAACTATTTCCAGGGCTTCAAGGGAGAGTATCCATCGTCAACTATCACAAGGTGCTGAACAACTTACAGCTGCTAGAGGAACCTCTGAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTGCTTATGCTTTAGAGGATGATATGAAGAACTTTTTTCTGGATTTAGCAACTAGTTGTGCATCTGTTATTTGTTGTCGCGTGTCTCCAAAACAAAAAGCATTGGTCACTAGACTTGTAAAATCCAGAACCGGTAAAACTACGTTAGGTATTGGGGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGACATAGGGATTGGAATAAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATGTTGCAATTGCACAATTTTGTTATTTGGAACCACTACTTCTTGTGCATGGACATTGGTGTTACCGAAGAATTTCATCAATGATATGTTACTTCTTTTACAAGAATATCACATTTGGATTCACTTTATTCTTATTTGAGGTTCATGCATCATTTTCTGGAGAACCTGCATATAATGATTGGTTTTTGTCTCTGTATAATGTATTTTTTTCGTCACTTCCCGTCATTGCCCTTGGGGTATTTGACCAAGATGTATCAGCTCGATATTGTCTGAGGTTTCCTATGTTATATCGAGAAGGTGTAGAAAACATCCTCTTTAGCTGGCGTCGAATAATTAGTTGGATGGTTAATGGATTTATTAGTTCCATAATAATTTTCTTCTTCTGCACAAAAGCTATGGAGATTCAGGCCTTTGATAAAGGAGGAAGAACTGCAGGAAGAGATATACTAGGAGCAACAATGTACACTTGCGTGGTTTGGGTAGTAAACTTGCAAATGGCACTTGCTATAAGTTACTTCACCTTGATTCAACATGTTTTAATATGGGGATCCATTGTTATCTGGTATATCTTCCTCTTGGCATATGGAGCAATGGCCTCATCATTTTCAGGAAATGCTTATCAAGTCTTTGCTGAAACTCTTGCTCCAACTCCTTCCTATTGGTTGTTGGTTTTTTTTGTAGTAATCACAACACTTGTACCATACTTCACTTTCTCTGCACTACAGATGCGATTCTTTCCCATGTATCATGAAATAGTACAATGGTTGAGGCACAAAGGAAAGACAAACGATCCTGAGTTTTGCGCTATGGTGCGACAAAGTTCATTGAGGCCGACAACTGTTGGATCAACAGCACGCAGAGCTGCCAAGACTAATAGTCTCAGCCTTAGAGGCAGCACCACTGACCATAGATGA | 3585 | 0.381 | MGRGRRLKKLHLSKIYTFTCGKKSLFNDEHSRIGSVGFSRVVLVNEFSENFNNTCENNNNNNYADNVVRSTKYTVANFLPKSLFEQFRRVANFFFLVTGVLSFTKLAPYTAVSAILPLIVVITATMVKEGIEDMRRKKQDIEVNNRIIEVHKGDGTFERTEWKNLKVGNIVRVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLHEYDFSDFKASIKCEDPNANLYSFVGSMEFKEQVHALSPQQLLLRDSKLRNTEYIFGAVIFTGHDTKVIQNSVSPPSKRSKIERKMDKVIYVLFFILFLMSFVGSVFFGITTKEDLKNNVMKRWYLRPDDSTIFFDPKRAPAAAFFHCLTALMLYSFFIPISLYVSIEVVKVLQSIFINQDINMYHEETDKPAHAVTSNLNEELGQVHTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMNRRNGLEFDDIMNSPDRKAPIKGFNFTDERIMDGNWVNEPHANVIRNFFRLLAICHTAIPEVDEDTGKVSYEAESPDEAAFVIAAKEVGFEFYKRTQTSLSIFELDPVSQQKVKRTYCLLNVLEFNSTRKRMSVIVKDERGRILLLCKGADSVMFERLANNGREFEENILEHVHEYADAGLRTLLLAFRELDEEEYKEFDAKFTEAKNSVSEERETMIEEVSDNIERNMVLLGATAIEDKLQHGVPNCIDKLSQAGIKIWVLTGDKMETAINIGLLREGMKQIIVHLDTPEIRSLEKVGDKTTISRASRESIHRQLSQGAEQLTAARGTSEQAFALIIDGKSLAYALEDDMKNFFLDLATSCASVICCRVSPKQKALVTRLVKSRTGKTTLGIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFCYLEPLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLFEVHASFSGEPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLRFPMLYREGVENILFSWRRIISWMVNGFISSIIIFFFCTKAMEIQAFDKGGRTAGRDILGATMYTCVVWVVNLQMALAISYFTLIQHVLIWGSIVIWYIFLLAYGAMASSFSGNAYQVFAETLAPTPSYWLLVFFVVITTLVPYFTFSALQMRFFPMYHEIVQWLRHKGKTNDPEFCAMVRQSSLRPTTVGSTARRAAKTNSLSLRGSTTDHR | 1194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151601g00004 | 1194 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 887 | 1137 | IPR032630 | - | |
Stsc151601g00004 | 1194 | Pfam | Cation transport ATPase (P-type) | 531 | 623 | - | - | |
Stsc151601g00004 | 1194 | NCBIfam | phospholipid-translocating P-type ATPase | 63 | 1144 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326 | |
Stsc151601g00004 | 1194 | SUPERFAMILY | Calcium ATPase, transduction domain A | 153 | 289 | IPR008250 | - | |
Stsc151601g00004 | 1194 | NCBIfam | HAD-IC family P-type ATPase | 830 | 938 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Stsc151601g00004 | 1194 | SFLD | C1.7: P-type atpase like | 414 | 910 | - | - | |
Stsc151601g00004 | 1194 | Gene3D | - | 121 | 292 | - | - | |
Stsc151601g00004 | 1194 | Gene3D | - | 699 | 897 | IPR023214 | - | |
Stsc151601g00004 | 1194 | MobiDBLite | consensus disorder prediction | 1168 | 1194 | - | - | |
Stsc151601g00004 | 1194 | PRINTS | P-type cation-transporting ATPase superfamily signature | 859 | 878 | - | - | |
Stsc151601g00004 | 1194 | PRINTS | P-type cation-transporting ATPase superfamily signature | 431 | 445 | - | - | |
Stsc151601g00004 | 1194 | Pfam | Phospholipid-translocating ATPase N-terminal | 52 | 114 | IPR032631 | - | |
Stsc151601g00004 | 1194 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 497 | 702 | IPR023299 | GO:0000166 | |
Stsc151601g00004 | 1194 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 433 | 439 | IPR018303 | - | |
Stsc151601g00004 | 1194 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 62 | 1137 | IPR023298 | - | |
Stsc151601g00004 | 1194 | SUPERFAMILY | HAD-like | 419 | 901 | IPR036412 | - | |
Stsc151601g00004 | 1194 | SFLD | p-type atpase | 414 | 910 | IPR044492 | - | |
Stsc151601g00004 | 1194 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 57 | 1148 | - | - | |
Stsc151601g00004 | 1194 | FunFam | Phospholipid-transporting ATPase | 124 | 293 | - | - | |
Stsc151601g00004 | 1194 | CDD | P-type_ATPase_APLT_Dnf-like | 68 | 1008 | - | - | |
Stsc151601g00004 | 1194 | FunFam | Phospholipid-transporting ATPase | 540 | 698 | - | - | |
Stsc151601g00004 | 1194 | Gene3D | - | 544 | 698 | IPR023299 | GO:0000166 | |
Stsc151601g00004 | 1194 | FunFam | Phospholipid-transporting ATPase | 698 | 899 | - | - | |
Stsc151601g00004 | 1194 | MobiDBLite | consensus disorder prediction | 1168 | 1188 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151601g00004 | Stsc-Chr151601 | 21597 | 28070 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151601g00004 | 10 | 1186 | Primary Pumps ATPases | AT1G68710 | 69.893 | 0.0 | 1784 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151601g00004 | K01530 | - | gmx:100785037 | 1917.12 |