Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151598g00007 ATGGGATTTGAATCTGAAGATGCTGCAAAGACTTTCTATAATGAGTATGCCCGACGTATGGGTTTCAACCCCAAACCTAGGCCTCAGAGTCATTCTAAACCTGACGGGGCAAATGCATGTCAGGAATTTGTTTGTGGTGGGGATGTTTTAAAAGGAAAGCCTGAAACTTGTAATGCAATGATTAGGATAGAGCGAAAGGGTCAACATAAGTGGTTTGTTACAAAATTTGTAAAGGAGCATAGTCATCCCACGTCAAGTTCTGGTGAGGTCCAGAGTCTCCGGCCAAGATCTGGTGAGGTCCAGAGTCTCCGGCCAAGATCTGGTGAGGTCCAGAGTCTCCGGCCAAGATCGGGTGAGGCCCAGAGTCTTCGGCCAAGTTCAGGTCAAGTCCAGAGTCTTCGGCCAAGTTCTGGTGAAGTCCAGAGTCTTCGGCCACGTAGGCACTTTTCTAGTGTTGGAAGAACAATGCCTGAAACTTACCAAGGAGTGGGGCTCGTTCCAAGCGGTGTCATGTGTATATCTATGGATAGGACTCCGGGGAATCGCAATTCCACTGAGAACATTCACGGGAATAGAAATTTTCCTGCTGTTGCTGCTAAGATTAACCCCCAAATTCCTGCTGTTGCTGCTAAGATTAACCCCCAAGTTCCTGCAGTTGCTGCTAACCCCCAAGTTCCTGCAGTTGCTGCTAAGACTAACCACCAAGTTCCCGCAGTTGCTGCTAAGACTAACCACCAAGTTCCTGCAGTTGCTGCTAAGACTAATCACCAAGTTCCTGCAGTTGCTGCAATGACTAATCATCAAGTTAAAAATTCTACATCAATGAATTATACTGTTAAACAACCTGTTCAGAAGAAGACACTTGGGAGGGATTGTCAGAATCTGCTGGAGTATTTTAAGAGAATGCAGGGGGAAAACCCTGGTTTCTTCTATGCTATACAACTTGATGAAGATAACCATATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGAGTGCTTACAATCATTTTGGTGATGCAATTAGTCTGGACACAACTTTCAAAGTGTATCAATACAAAGTGCCATTTGTACCATTCACTGGGGTAAACCATCATGGCCAGACAATATTATTTGGTTCTGCACTCCTTTTGGATGATTCTGAAGATTCTTTTGTGTGGCTTCTCAAGACATTCCTGACAGCAATGAATGACCGCCACCCCATTTCTATTACTACAGGTCAAGATAAAGCCATGCAAAATGCGGTTTCACAAGTTTTCCCTCATGCACGACACTGTCTAAACAAGTGGGATGTCTTGAGAGAAGGCCAGGAAAGGTTAGCTCATGTATGTCAAATGCACCCTAATTTTCAGGGTGAACTTTATAATTGTATTAACCTGACTGAAACTATTGAGGAGTTTGATTCATCTTGGAAATCTATTATGGATAAATATGACCTCAGAAGAAATGAATGGCTTCAGTCGTTGTACCATGCTCGTGATCAGTGGGTCCCAGCATATTTCCGTGATTCGTTTTTTGCTGCAATATCTCCTAATCATGGATTTGATAGCTCTTTTTTCGATGGTTTTGTTAACCCACAAACAACATTACCAATTTTCTTTAGGCAGTATGAACAAGCTATGGAGATGTGGTTTGAAAGGGAAATAGAATTAGATTCTGAGACAATTTGCAGCCAACCTGTTTTGAAGACACCTTCACCAATGGAGAAACAGGCTGCTAATCTTTACACAAGAAAAGTCTTTTCAAAGTTTCAAGAAGAACTAGTTGAAACTTTTGTTTATACTGCAAACAGAATTGAAGAAGAAGGGGAAAATAGCATATTCAGGGTTGCTAAATTTGAGGATGACCAAAAGGCATATATTGTCACATTCAACCATTCTGAGTTGAAAGCTGAATGTAGTTGTCAAATGTTTGAGTATTCAGGAATATTGTGTAGGCATGTCCTAACTGTTTTCACTGTTACTAATGTACTTACTTTACCATCCCATTACATCTTGAAACGGTGGACAAGGAATGCAAAAAGTCATGTTGGAGTGGATGAACATGCCGGTGAATCACATGGACAAGACTCTATGACATCTCGGTATGGCAATCTGTGTCGAGAAGCCATAAAATATGCCGAGGATGGGGCAATATCTGTCGAAACTTACAGTGCTGCAATGAATGCTCTTAGAGATGTTGGAAAGAAACTTGCTGTCGCAAAGCGAAATTTTGCAAAAGTTGCACCACCTGGTAATCGGAGTGTTGGCAATGCTCATGATGACAAGAAAAACCAGACTTCAAGATTAGATACACCCCCACTTTTGTGGCCACGGCAGGATGAAACAACAAGGAGGTTTAATCTTAATGATGCTGGTGCACCTGTTCAACAGTCTGTTCAACAGTCATTTGGCGATCTAAATTTCCCAAGAATGGCTCCAGTGTCTGTCCAGAGAGATGACGGTCAAGATGAAAACATGGTAGTTCTTCCCTGCATGAAATCAATGACATGGGTAATGGAAAACAGAAGCTCGGCTCCGGGGAATAAAGTAGCTGTTATCAATCTGAAGTTGCAAGATTATACCAAGGTTCCATCAATAGAAACTGAGGTTAAGTTTCAGCTCTCTAGAGTTTCTTTGGAACCAATGTTGAAGTCTATGACTGGCATCAGTGAACAACTTTCTTCACCGGCTAATAAGGTTGCTGTAATAAATCTGAAGCTTCAAGACGGCGACTCAATTTCTGGGGAATCTGAAGTCAAGTTTCAGGTTTCCAAGGACACATTGGGTGCTATGCAACGATCAATGTCCTATATCCGTGAGCAACTTTCTGCTGATGGGTATGTGCAGTCAGATCCAATCTCTGTAACTAAAAGGCAGAAGAAGTGA 2868 0.4219 MGFESEDAAKTFYNEYARRMGFNPKPRPQSHSKPDGANACQEFVCGGDVLKGKPETCNAMIRIERKGQHKWFVTKFVKEHSHPTSSSGEVQSLRPRSGEVQSLRPRSGEVQSLRPRSGEAQSLRPSSGQVQSLRPSSGEVQSLRPRRHFSSVGRTMPETYQGVGLVPSGVMCISMDRTPGNRNSTENIHGNRNFPAVAAKINPQIPAVAAKINPQVPAVAANPQVPAVAAKTNHQVPAVAAKTNHQVPAVAAKTNHQVPAVAAMTNHQVKNSTSMNYTVKQPVQKKTLGRDCQNLLEYFKRMQGENPGFFYAIQLDEDNHMSNVFWADARSRSAYNHFGDAISLDTTFKVYQYKVPFVPFTGVNHHGQTILFGSALLLDDSEDSFVWLLKTFLTAMNDRHPISITTGQDKAMQNAVSQVFPHARHCLNKWDVLREGQERLAHVCQMHPNFQGELYNCINLTETIEEFDSSWKSIMDKYDLRRNEWLQSLYHARDQWVPAYFRDSFFAAISPNHGFDSSFFDGFVNPQTTLPIFFRQYEQAMEMWFEREIELDSETICSQPVLKTPSPMEKQAANLYTRKVFSKFQEELVETFVYTANRIEEEGENSIFRVAKFEDDQKAYIVTFNHSELKAECSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSHVGVDEHAGESHGQDSMTSRYGNLCREAIKYAEDGAISVETYSAAMNALRDVGKKLAVAKRNFAKVAPPGNRSVGNAHDDKKNQTSRLDTPPLLWPRQDETTRRFNLNDAGAPVQQSVQQSFGDLNFPRMAPVSVQRDDGQDENMVVLPCMKSMTWVMENRSSAPGNKVAVINLKLQDYTKVPSIETEVKFQLSRVSLEPMLKSMTGISEQLSSPANKVAVINLKLQDGDSISGESEVKFQVSKDTLGAMQRSMSYIREQLSADGYVQSDPISVTKRQKK 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151598g00007 955 MobiDBLite consensus disorder prediction 742 770 - -
Stsc151598g00007 955 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 731 IPR031052 GO:0006355
Stsc151598g00007 955 Pfam MULE transposase domain 342 432 IPR018289 -
Stsc151598g00007 955 MobiDBLite consensus disorder prediction 80 155 - -
Stsc151598g00007 955 MobiDBLite consensus disorder prediction 80 139 - -
Stsc151598g00007 955 ProSiteProfiles Zinc finger SWIM-type profile. 620 656 IPR007527 GO:0008270
Stsc151598g00007 955 SMART 26again6 631 658 IPR006564 GO:0008270
Stsc151598g00007 955 Pfam FAR1 DNA-binding domain 11 83 IPR004330 -
Stsc151598g00007 955 Pfam SWIM zinc finger 626 654 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151598g00007 Stsc-Chr151598 27707 32019 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151598g00007 MULE 6.5e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151598g00007 - - aip:107608865 1594.33