Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151595g00002 ATGGCAGGTGTTAATTCAAAGAATGGAAGCATAGAAGAGAAGGTTTTGAGTGGTTTAAGCAGCAAGGTATCTTCTCGTTCCATGCTTATATCTCCTCAGACAGAGGGCGAGATTCTGCTATCCACCAATTTAAAGAACTTCACCTTCATTGAACTAAGAACTGCTACAAGGAACTTTCGTCCGGATAGTGTGGTCGGCGAAGGTGGATTCGGTTCTGTATTTAAGGGCTGGATCGATGAGCAGACGCTCGAGCCCACGAAACCAGGGACCGGACTTGTCATTGCAGTGAAGAGGCTAAATCAAGAGAGCAAACAGGGACACATTGAATGGCTGACAGAAATCAACTACCTGGGTCAGCTGGATCATCCTAATCTTGTGAAACTGATAGGTTACAGCTTAGAGGATGATCACCGGATTTTGGTATATGAGTTTTTGACCAAAGGCAGTTTAGATAATCATTTGTTTAGGAGAGCTTCTTATGTTCGCCCTCTTTCTTGGGACGTACGCATGAGTATCGCGCTTGATGCAGCTAAGGGCCTTTCATTTCTTCACAGCGACGAAGTTGATGTAATATACCGAGACTTCAAGACTTCCAATATCTTGCTTGATTCGAATTATCATGCAAAACTCTCTGATTTTGGATTAGCAAAAGATGGACCAGTAGGTGACAAGAGCCATGTCTCTACAAGGATAATGGGAACATTTGGCTATGCAGCTCCTGAATATATAGCCACAGGTCACTTAACCAAGAAGAGTGATGTATACAGTTTCGGAGTAGTACTGCTCGAAATCATGTCAGGGAAACGTGCACTAGATAAAAACAGACCAACGGGGGAGCATAATTTGGTGGATTGGGCCAAGCCATTACTCGTCAGCAAACGAAAAATCTCACAGGTGATGGATTCTCGTTTAGACGGTCAATATCCGTTGCGCGAGGCAATGAAAGTAGCAGTTCTTGCAATCAAATGCCTCTCTGCTGAACAGAAATTTAGGCCTACCATGGATGAGGTGGTAAGATCCTTGGAGAACCTCAAGGATTCTGAAGACATAACAGCAAGTGGAGTGGGAAAATCTCAAGATCTTGGTAATAGTTCAAGACGAAATAGAAATAGTTCAAAACAAAATAGAAGAAGTAACAATGAATCTTTAAATGGAGAAGGTAGTAGTAATCAGACACCATCATCAGCTTCTCCTGTTCACACTTAG 1206 0.4279 MAGVNSKNGSIEEKVLSGLSSKVSSRSMLISPQTEGEILLSTNLKNFTFIELRTATRNFRPDSVVGEGGFGSVFKGWIDEQTLEPTKPGTGLVIAVKRLNQESKQGHIEWLTEINYLGQLDHPNLVKLIGYSLEDDHRILVYEFLTKGSLDNHLFRRASYVRPLSWDVRMSIALDAAKGLSFLHSDEVDVIYRDFKTSNILLDSNYHAKLSDFGLAKDGPVGDKSHVSTRIMGTFGYAAPEYIATGHLTKKSDVYSFGVVLLEIMSGKRALDKNRPTGEHNLVDWAKPLLVSKRKISQVMDSRLDGQYPLREAMKVAVLAIKCLSAEQKFRPTMDEVVRSLENLKDSEDITASGVGKSQDLGNSSRRNRNSSKQNRRSNNESLNGEGSSNQTPSSASPVHT 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151595g00002 401 FunFam Probable serine/threonine-protein kinase PBL8 145 360 - -
Stsc151595g00002 401 Gene3D Transferase(Phosphotransferase) domain 1 145 367 - -
Stsc151595g00002 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Stsc151595g00002 401 PANTHER OS01G0588500 PROTEIN-RELATED 31 345 - -
Stsc151595g00002 401 SUPERFAMILY Protein kinase-like (PK-like) 34 341 IPR011009 -
Stsc151595g00002 401 Gene3D Phosphorylase Kinase; domain 1 35 144 - -
Stsc151595g00002 401 MobiDBLite consensus disorder prediction 352 401 - -
Stsc151595g00002 401 FunFam Serine/threonine-protein kinase BIK1 26 144 - -
Stsc151595g00002 401 MobiDBLite consensus disorder prediction 349 401 - -
Stsc151595g00002 401 ProSitePatterns Protein kinases ATP-binding region signature. 65 97 IPR017441 GO:0005524
Stsc151595g00002 401 Pfam Protein tyrosine and serine/threonine kinase 63 341 IPR001245 GO:0004672|GO:0006468
Stsc151595g00002 401 ProSiteProfiles Protein kinase domain profile. 59 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151595g00002 Stsc-Chr151595 10071 12254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151595g00002 45 349 Glycoside Hydrolase AT3G07070 48.534 7.75e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc151595g00002 PK_Tyr_Ser-Thr 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151595g00002 - - gmx:106795104 572.392