Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151594g00005 ATGGATAAATCAGAGCAGACTCAGCAGCAGCAGCAACAACAACAACAACAGCATGTGATGGGTGTTGCAGCAAATGCTAGCCAAATGGCTTATTCTTCTCACTACCAGACTGCTCCTATGATGGCATCTGGTACACCTGCTGTAGTTGTGCCTTCGCCGACGCAGCCTCCAACGGCTTTTTCCAATAACCCGCACCAACTTGCATACCAGCAAGCACAACACTTCCATCACCAGCAGCAGCAACATCAACAGCAGCAGCTTCAAATGTTCTGGGCTAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAGAACCACAGCCTACCCCTTGCTCGCATTAAAAAGATAATGAAAGCCGATGAAGATGTACGGATGATTTCGGCAGAAGCTCCAGTAATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTTTGCGATCTTGGATCCACACTGAAGAGAACAAGAGGAGAACTCTGCAAAAGAATGATATAGCAGCTGCAATTTCGAGAAATGATGTTTTTGATTTCTTGGTTGATATCATTCCAAGAGATGAGTTGAAAGAAGAGGGACTTGGAATAGCAAAGGCTACTATTCCAATGGGTTCTCCGGCTGATATGCCATATTATTATGTCCCTCCGCAGCACCCTGTAGGACCTCCAGGGATGATAATGGGAAAGCCAGTTGATCAAGCAGCACTGTATTCCACACCACAGCCTCGTGCTCCAATGGCTTTCATGCCGTGGCCGCAGCCACAACCCGCACAACAGCAGCCACCCCAACAGGAACAAACAGACTCTTGA 810 0.463 MDKSEQTQQQQQQQQQQHVMGVAANASQMAYSSHYQTAPMMASGTPAVVVPSPTQPPTAFSNNPHQLAYQQAQHFHHQQQQHQQQQLQMFWANQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGIAKATIPMGSPADMPYYYVPPQHPVGPPGMIMGKPVDQAALYSTPQPRAPMAFMPWPQPQPAQQQPPQQEQTDS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151594g00005 269 MobiDBLite consensus disorder prediction 1 21 - -
Stsc151594g00005 269 FunFam Nuclear transcription factor Y subunit gamma 73 186 - -
Stsc151594g00005 269 SUPERFAMILY Histone-fold 64 180 IPR009072 GO:0046982
Stsc151594g00005 269 Gene3D Histone, subunit A 69 186 IPR009072 GO:0046982
Stsc151594g00005 269 Pfam Core histone H2A/H2B/H3/H4 62 171 IPR007125 GO:0003677
Stsc151594g00005 269 MobiDBLite consensus disorder prediction 245 259 - -
Stsc151594g00005 269 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 52 253 - -
Stsc151594g00005 269 MobiDBLite consensus disorder prediction 242 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151594g00005 Stsc-Chr151594 29641 32306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151594g00005 64 230 CCAAT-HAP5 Transcription Factor Family AT1G08970 69.231 1.53e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Stsc151594g00005 Histone 2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151594g00005 K08066 - gmx:100796987 389.808