Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151593g00001 ATGGCAGTGGATCTGGTAGGGGTTCCACGGGTGAGGATGGAACAACAAGAACAAGTTGCAATTCAAGAAGCTGCTTCCGCTGGTTTGAAGAGCATGGAGCATCTCATACGCCTCCTCTCTTCCCAATCTCATTCTCCTTCTACTTCCTCTTCATCTCTCCCTCACTCTAACAATAATAACAACCTCAACTGCTCCCAACTAACCGACTTTACAGTTTCCAAGTTCAAGCAAGTCATCAACCTCCTCAACCGCACAGGCCACGCCCGATTCCGTCGCGCTCCGTCACAAAACCACCCAACCCCTCCACCTCAGCCTGGAACCACCACCACCGGCTTGACGCTAGATTTCGCCAAGCCAACCATTCTGAACTCCAAGCCAGCCGTCACCAAGGATGTCGATCAAGACATGGAACTTAGTATCTCCCCTCCGGTATCCACCACCGCCTCCTCCATCACCTGCGACGCTAGCGTCTCCGACGGCAAGATTGGCCCCTTCCTTACCCTTCCAGCCCCCGCTCCCCCTCCCTCCGGGAAACCTCCTCTCTCTTCTTCTCACCGAAAAAGGTGCCATGACGCAACCCTCTCCGGGAAAGCCGCCTCCTCTGCCCACTGCCATTGCTCCAAAAGAAGGAAATCACGTGTGAAACGAACGATCCGTGTGCCGGCGATAAGCTCGAAGATCGCCGATATCCCGCCTGATGAATTCTCGTGGAGAAAGTACGGTCAGAAACCGATCAAGGGCTCACCTTACCCTCGTGGCTACTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCCAGGAAGCATGTGGAGAGAGCCCAAGACGATCCGAAGATGCTAATAGTGACGTACGAAGGGGAGCACCGTCACAATCCCCAGCCACACTCGCCGGAAACTGCCGTCACTCCCGCCGTCACCTCTGCTTGTGGTTTTAGCCTCCGATCGTGTTGA 948 0.5527 MAVDLVGVPRVRMEQQEQVAIQEAASAGLKSMEHLIRLLSSQSHSPSTSSSSLPHSNNNNNLNCSQLTDFTVSKFKQVINLLNRTGHARFRRAPSQNHPTPPPQPGTTTTGLTLDFAKPTILNSKPAVTKDVDQDMELSISPPVSTTASSITCDASVSDGKIGPFLTLPAPAPPPSGKPPLSSSHRKRCHDATLSGKAASSAHCHCSKRRKSRVKRTIRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHNPQPHSPETAVTPAVTSACGFSLRSC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151593g00001 315 FunFam WRKY transcription factor 65 215 292 - -
Stsc151593g00001 315 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151593g00001 315 ProSiteProfiles WRKY domain profile. 226 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151593g00001 315 Pfam Plant zinc cluster domain 186 229 IPR018872 -
Stsc151593g00001 315 Gene3D WRKY domain 218 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151593g00001 315 MobiDBLite consensus disorder prediction 90 112 - -
Stsc151593g00001 315 SUPERFAMILY WRKY DNA-binding domain 229 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151593g00001 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 297 IPR044810 GO:0003700
Stsc151593g00001 315 SMART WRKY_cls 231 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151593g00001 315 MobiDBLite consensus disorder prediction 40 60 - -
Stsc151593g00001 315 MobiDBLite consensus disorder prediction 169 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151593g00001 Stsc-Chr151593 3351 5249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151593g00001 1 305 WRKY Transcription Factor Family AT2G24570 50.298 4.16e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151593g00001 WRKY 4.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151593g00001 - - gmx:732587 364.385