Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151590g00001 ATGCAGCAAGATCAGCTCAAGAAGGATATGAAAGAGTTGGACTTCTTCACTGACTATGGGGATGCCAACAGGTACAAGATTCTTGAAGTTATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCAGCAATTGATACACACACTGGGGGAAAAGTTGCAATAAAGAAGATTCATGATGTTTTTGAGCATATATCCGATGCCATCAGAATCCTCCGCGAGGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGATATTAAGCGGATCATGTTGCCTCCTTCGAAGAGAGATTTCAAAGATATTTATGTGGTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACCCGCGAACACCATCAGTTTTTCCTTTATCAGATGCTACGTGCTTTGAAGTATATGCATACAGCCAATGTGTATCACAGAGATCTTAAACCCAAGAATATACTGGCTAATGCAAACTGCAAGCTCAAAATTTGTGATTTTGGACTGGCCAGAGTTGCATTCAATGATGAACCAACTGCAATATTTTGGACGGATTATGTTGCTACTAGATGGTACAGAGCCCCTGAGCTGTGTGGTTCATTCGCATCTAAGTATACTCCAGCGATTGATATATGGGGCATAGGATGCATTTTTGCTGAGGTGCTAACAGGAAAACCGTTGTTCCCTGGCAAAAGTGTTGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCATCACCCGAAGTTATTGCAGGAGTTCGAAATGAGAAGGCAAGGAAGTACCTAACGGAAATGCGGAAGAAACCTCCTGTGCCATTTGAAAAGAAATTTCCTAATGCTGATCCATTGGCACTTCGCCTACTGCAAAGGCTTTTAGCATTTGATCCAAAGGAGCGGCCAACTGCTCAAGAGGCACTAGCTGATCCTTTCTTCAAGGGTTTGGCCAAAGTTGAGAGAGAGCCTTCTTGTCAGCCAATTTCAAAATTGGAATTTGAATTTGAGAGGAGAAGATTGAATAGGGAGGATGTTAGAGAACTCCTATATCGAGAGATTCTGGAATATCATCCTCAGCTTCTCAAAGATTACATGAGTGGAATGGAAGGGACAAACTTCGTCTATCCTAGTGCCATAGATCATTTGAGAAAGCAATTTGCTTATCTTGAGGAAAATCATGGTAAAAGTGGCCCAGTGATTCCTCCGGAGAGGAAGCATGTTTCTCTTCCGAGGTCAACGGTACATTCTAGTACGATTACTCCCAGTGCCCAGCCATCTATTCCTCCAAATGAGAACAAGCAAATTGCAGAAGATGCATCTAAGATTTCAAGAGCTGCCGGAGAATCTAATTCAACCAGTCATATAGTAAGGCCTTCAAGACCTCCACCAAAGGTTCCAACAGCAAAACCTGGTAGAGCTGTAGGGACAGTTTCATTCTATGATAATGGGAGAAACATGAAAGACAATTACGACCCAAAGATGTTCTACCGAAATACTCTTCCTCAAGCAGTCTCTCCACACTTTTTCCATAGGATGTGCCCTACAAACCCCAATACAACAACAGAGGCATACAAGGATGTTTCACAAGGCAAACACCAACTCCCATCCCAGCAGGGTAATGTGCCGGCGAGGCCGGCCATAGATCTTAATACAAACCCATACTACCAGCATGGGAAGAGTGATCATGTCTCTGCTATTGATGCTAAGTTGATTCAAGCACAATCCCAGTTTGGTGCAGTTGGTGCTGCAGCAGTAGCCGTGGCTGCACACAGGCACTCAGGGTGCTTTTAG 1800 0.4333 MQQDQLKKDMKELDFFTDYGDANRYKILEVIGKGSYGVVCAAIDTHTGGKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDEPTAIFWTDYVATRWYRAPELCGSFASKYTPAIDIWGIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPEVIAGVRNEKARKYLTEMRKKPPVPFEKKFPNADPLALRLLQRLLAFDPKERPTAQEALADPFFKGLAKVEREPSCQPISKLEFEFERRRLNREDVRELLYREILEYHPQLLKDYMSGMEGTNFVYPSAIDHLRKQFAYLEENHGKSGPVIPPERKHVSLPRSTVHSSTITPSAQPSIPPNENKQIAEDASKISRAAGESNSTSHIVRPSRPPPKVPTAKPGRAVGTVSFYDNGRNMKDNYDPKMFYRNTLPQAVSPHFFHRMCPTNPNTTTEAYKDVSQGKHQLPSQQGNVPARPAIDLNTNPYYQHGKSDHVSAIDAKLIQAQSQFGAVGAAAVAVAAHRHSGCF 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151590g00001 599 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151590g00001 599 FunFam Mitogen-activated protein kinase 15 119 - -
Stsc151590g00001 599 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Stsc151590g00001 599 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Stsc151590g00001 599 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 360 - -
Stsc151590g00001 599 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151590g00001 599 MobiDBLite consensus disorder prediction 414 436 - -
Stsc151590g00001 599 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Stsc151590g00001 599 FunFam Mitogen-activated protein kinase 111 339 - -
Stsc151590g00001 599 MobiDBLite consensus disorder prediction 396 483 - -
Stsc151590g00001 599 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151590g00001 599 CDD STKc_TDY_MAPK 24 361 - -
Stsc151590g00001 599 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Stsc151590g00001 599 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151590g00001 Stsc-Chr151590 902 5920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151590g00001 1 599 MAP Kinase Gene Family AT1G53510 68.489 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc151590g00001 Pkinase 2.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151590g00001 - - gmx:100800878 991.104