Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151582g00003 ATGACTGCCATTGATGATGATGATGATAACTTCGACAAGTTTTCTGGTCTGCCAGAGTTGGGAATAATTGCCCTTCATATCAAGCTCCGAGCCACGGATGGAAACGAGACAAAAACACCTGGCCCTGGTGCTCAGTATGCCCGTGCCTTGGCTTGGTTTGGGATAAAAACTGGCCAAATAGGTAAAATGACTGCCATTGATGATGATGATAACTTCGACGAGTTTCCTGGCTTGACAATGTTTCCATGA 249 0.4538 MTAIDDDDDNFDKFSGLPELGIIALHIKLRATDGNETKTPGPGAQYARALAWFGIKTGQIGKMTAIDDDDNFDEFPGLTMFP 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151582g00003 82 Gene3D Ribosomal protein S11 10 70 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151582g00003 Stsc-Chr151582 11034 15947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151582g00003 19 71 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 62.963 7.84e-16 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151582g00003 K02955 - mus:103988271 68.5514