Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151575g00004 ATGAAGATGATTTCAGAGACTGGATTTGCCGCTGCTGCAATTGAAGCAGATAAAAAAGGGAGCACTCACCAAGAAACTAATGTTGAAGTTGCAGATGTAAACCACTCAACTAGCTGTTTTGGTGAAGAAATATGTATGGGAAGTTATTCTAGTGAAGCTAGCTATGATGGTGAACAGATGCATAATATTGAGTTTGATGGTTGTCTTTCCCAGGATACTGATAATGTTGAATTGGATGGTTCTGGTTACCAGGATAGTGACATACACTGGAAGGAGGAGGAGCAGTTCTTTTCATTTGCCAATGGAGAAAACATTGATTCTTCTATGTTCACAGGGGAGGAAAGTGACTCAAACCTTGGGTCCTTATCAGAGAGTTCGCATGATGTTTCTGTGATGTGGTTAGATGACATACTTGCCAACCATCATGCGGATATTCTTGTAGAAGGAACACTCAGAGAAGCCAATGATGAAAAAGACACCTATTTTGAAGCACAATGTCATGCCTCTAATTCTATTTTGGAAGGTGCATGTGAAAGCATGGAGCTTGAGACTCAAGAAAGTGATTACCTGTCCAATGGCATAAGTTATGATCAACTTCCTCCAACATACAATGAAGCATGTCAGCACCTCACAGATATAGATGTAACAGAAAATTGCAAGCTTGAGGAGAGCTATGAAGATAGCAACAGAAGCCTAGAGAATAATGATGAAGGCATTAGCAAAGACAACCAAATTCACCCATCAGAGGTACTAGAAGAAAGCAATCCTGTTGTTCAGGACCATGAACTATTGGAAGAAGATCAAGGTAACACTAGTAAGTTCCAGTGCACAATCTGTATAAGTGGTGAAGATCTTAACACAAGCAAGAAGTGGCTATGGGAAACAAAGCGCAAGAGACTAGAGCAAGATGATGAGCAAATGAGAAAGATTAAACCACGAAAACCAAATTTCCTCCCCCTGGTTCCTGAACCAGAGCCAGAAAAGGTTAGCCTGAAGCATCAAATTATGTATGAAAGAAAAGATACTGAGGAATGGATGCTTGATTATGCACTCAGACAAGCTGTCACACAACTTGCTCCAGCTAGGAAGACGAAAGTGGCTTTGTTGGTTGAAGCTTATGAAACAGTAATGTCACTACCTAAATGTCAAAGCCACAATTCACCCTTTGCTCATGCAAGACCTATTCAAGCTTTTAGCTGA 1200 0.405 MKMISETGFAAAAIEADKKGSTHQETNVEVADVNHSTSCFGEEICMGSYSSEASYDGEQMHNIEFDGCLSQDTDNVELDGSGYQDSDIHWKEEEQFFSFANGENIDSSMFTGEESDSNLGSLSESSHDVSVMWLDDILANHHADILVEGTLREANDEKDTYFEAQCHASNSILEGACESMELETQESDYLSNGISYDQLPPTYNEACQHLTDIDVTENCKLEESYEDSNRSLENNDEGISKDNQIHPSEVLEESNPVVQDHELLEEDQGNTSKFQCTICISGEDLNTSKKWLWETKRKRLEQDDEQMRKIKPRKPNFLPLVPEPEPEKVSLKHQIMYERKDTEEWMLDYALRQAVTQLAPARKTKVALLVEAYETVMSLPKCQSHNSPFAHARPIQAFS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151575g00004 399 SMART CaM_binding_2 266 378 IPR012417 GO:0005516
Stsc151575g00004 399 Pfam Plant calmodulin-binding domain 286 378 IPR012417 GO:0005516
Stsc151575g00004 399 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 13 378 IPR044681 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151575g00004 Stsc-Chr151575 28994 30193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151575g00004 305 397 Calmodulin-binding Proteins AT2G38800 51.613 6.69e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151575g00004 - - adu:107476638 585.489