Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151570g00003 ATGGACGAGCTTGCTTGCTTCATGGACTGGGATCTGGAATCCATTGTGAGAGGCTTCCCATCATCAACTGCAACCGATCCAAACCCTAATAATTTCCTTCTTGATCAAGAAGATTATGACCTACTTTTCAGTACTACTTCTTTTCCTGAATTCTCAGAAACCACAAGGGTCCTTGATGAATTGGACGACCTTTACAAGCCTTTCTACCCAGTTTTCCACGCTACTCTTTCCCCGAATGTTCAGAATAATCCCGTACCATTACCCGAAGATGCCGTCAAAGAAGACTTGCAAGTTCCCACATCAGTTTCTAAACCTAAAAAAAGCAAGAAGAGCACGAAGAAGAGGGAAGTGAAGGAGGTTATAGCGGCGGAAATCGGTGTTTGCGACGCATGGGCGTGGCGAAAATATGGACAGAAACCTATAAAGGGATCACCATATCCACGGAGCTATTACAGATGCAGCAGTTCCAAAGGATGCTTGGCGAGGAAACAAGTTGAAAGGAATCATTTGGATCCATCCATTTTCTTGGTTACCTACTCCGCCGAGCACAACCATCCCTACCCTACCCGCCGCAACTCTCTCGCAGGAATTTCACGCAAGAATCACAACTCCTTAACAACTGCTCCCATCACTGCTACTTGTTCTTCTTCTTCCAATTCCTCGTCCATGGAAGAAGAAGAAGATAAGGGATTATTCAAGAAGCAGCAGGAACTACTTCATGCCCAAGCTGCTCAATTTGGTTTCCAAACGAAGACATATATGGACCGTCAATTTATGAGGCTTAATGAACAAGAACTTGCATTACATGGTGGTGCTGATTTCATTGTTGGTAATTATTAA 840 0.4405 MDELACFMDWDLESIVRGFPSSTATDPNPNNFLLDQEDYDLLFSTTSFPEFSETTRVLDELDDLYKPFYPVFHATLSPNVQNNPVPLPEDAVKEDLQVPTSVSKPKKSKKSTKKREVKEVIAAEIGVCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNHLDPSIFLVTYSAEHNHPYPTRRNSLAGISRKNHNSLTTAPITATCSSSSNSSSMEEEEDKGLFKKQQELLHAQAAQFGFQTKTYMDRQFMRLNEQELALHGGADFIVGNY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151570g00003 279 Gene3D WRKY domain 110 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151570g00003 279 SUPERFAMILY WRKY DNA-binding domain 127 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151570g00003 279 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 81 240 IPR044810 GO:0003700
Stsc151570g00003 279 MobiDBLite consensus disorder prediction 94 115 - -
Stsc151570g00003 279 Pfam WRKY DNA -binding domain 129 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151570g00003 279 ProSiteProfiles WRKY domain profile. 122 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151570g00003 279 SMART WRKY_cls 127 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151570g00003 279 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151570g00003 Stsc-Chr151570 12277 13571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151570g00003 1 199 WRKY Transcription Factor Family AT4G23550 48.387 3.48e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151570g00003 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151570g00003 K13426 - gmx:102663255 236.884