Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151566g00007 ATGAGATCAACATATTTAGGTGACATGGCATCTGCTTGGGGCAGTTGCTTATTGTTACTTTGCGGTCTCATTATAGGAATGATTTTGAGTTCATTGAAGGCATTAATATCAGGCTGGTTATCCAATTGGATATCGGCTAGATCCCACAAAACTAAGCGGGTCTGTAGATACGATGTGTTCCTAAGCTTCCGGGGTGAAGTCCGCTACGGTTTCGTTGATCATCTTTACAAATATCTCATCAGTCAAGGCATTTCCACATTCATGGATGATAAAAGGCTCGAGAGAGGAGACGAAGTTTATCCCGAGCTAATGGATGCAATTAGGGATTCAAGGCTTGCTATCATTGTCTTCTCTAAGGCATACCCGACCTCAACGTGGTGCCTCGATGAAATGTCCGCTATAGAAGATCGCCGTAGACAAAAGGAACAAATTGTTTACCCAGTTTTCTATGACATTACTGCTTCTGATGTTGGAAGACAGAAGGGCCCGTACGAAGATCACTTCAATTCAGAGCGACTGAGGAAGCTCCCCCAAAAAACGGTTAACCGATGGAAGTCTCACATGAAGCGTTTGTCCAAACTGTATGGGTTCCCTATGGTAGACCACCCAAACATACCACAGACTGAACACCTGGAGAAGATTGTTCTTGATGTGGCAGAGAAATTGAATCACCAATTCACATTACATCACAGAGATCTAATTGGGATAAAACCCCGTCTAGAAGAGCTACAAAGACTACTCAATTTGACATCAGAGGATGTTGCTTTTCAAATTCTTGAAATTTGGGGCATGAGCGGTATAGGAAAGACGGTTCTTGCTGAGATCCTATTCGACAAAATCTCGTATCAATTTGATGCTTGCTGTTTTATCAATGACGTAAAAGGTATATATAGAAAGCATGGCAAAGAGGAGATTCAAAAAGAAATTCTTCGTCAAATTTTCCGGAAAAAAGATCTAAAATTTCAAAGTTCTCCCGGAATAACCAAGATGCTACAAAACAGCCTATGCAACCCAAATCTCCCTAGAAAGGCTCTTATAGTTCTTGACGATGTTACTCATCCAAAGCAATGGGATGATTTGGGTATCGATCATGATTTACTTGGGACAGGAAGCAGAGTTGTCTTAACTAGTAGATTTAAGCATGTTCTTAATGTGAGTAAATCGTATGAAATTTACGAGGTTCCACTATTGAATCCTGAAGAAGAAGCTCTTGAACTTTTTCAAAGGAAAACCTTCAAGATTGATTCTCCTAATCCTACTGTCCGTGATTTATCACTTAAGGTAATAGAATATGCTGAAAATCTTCCTTCGGCAATTGTGGAACTGGGTTCCTACTTGAGACCAAAAGCTGAAGTGCAATGGGAACGTCACTTGGAGAGATGGAGAAAATATCCAGATGAAGAATATATGAGGTTGCTGCAGGAAACAAGTTATAAAGATCTCAAGGGAGATGAGAAGATAATATTTCTAGATATAGCTTGTTTCTTTGGGGGGAAAAGTAACATGGATGTGGAGTTAATTCTACAGAGTAGAATATCTGATGCCGACCTTGCCATTCAAGAGATCTGGAGGAAATCACTCATAAAAATTAGGAACGGCAAAATTCATATGCATCAAACATTACGAGAGTTGGGCAAGTATATTGTTCGGGGCGATAATACAGAAGATCCAAAGTGCTGGTCTAGATTGTGGGAAGCAAAGGATTTCCAAAGAGTCTTGATGTCAGATATGGTAACAAGTCATCCTCACCATATTATTATTTGA 1764 0.4002 MRSTYLGDMASAWGSCLLLLCGLIIGMILSSLKALISGWLSNWISARSHKTKRVCRYDVFLSFRGEVRYGFVDHLYKYLISQGISTFMDDKRLERGDEVYPELMDAIRDSRLAIIVFSKAYPTSTWCLDEMSAIEDRRRQKEQIVYPVFYDITASDVGRQKGPYEDHFNSERLRKLPQKTVNRWKSHMKRLSKLYGFPMVDHPNIPQTEHLEKIVLDVAEKLNHQFTLHHRDLIGIKPRLEELQRLLNLTSEDVAFQILEIWGMSGIGKTVLAEILFDKISYQFDACCFINDVKGIYRKHGKEEIQKEILRQIFRKKDLKFQSSPGITKMLQNSLCNPNLPRKALIVLDDVTHPKQWDDLGIDHDLLGTGSRVVLTSRFKHVLNVSKSYEIYEVPLLNPEEEALELFQRKTFKIDSPNPTVRDLSLKVIEYAENLPSAIVELGSYLRPKAEVQWERHLERWRKYPDEEYMRLLQETSYKDLKGDEKIIFLDIACFFGGKSNMDVELILQSRISDADLAIQEIWRKSLIKIRNGKIHMHQTLRELGKYIVRGDNTEDPKCWSRLWEAKDFQRVLMSDMVTSHPHHIII 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151566g00007 587 SUPERFAMILY Toll/Interleukin receptor TIR domain 55 196 IPR035897 -
Stsc151566g00007 587 Gene3D - 399 486 IPR042197 -
Stsc151566g00007 587 Gene3D - 55 221 IPR035897 -
Stsc151566g00007 587 Pfam TIR domain 57 228 IPR000157 GO:0007165
Stsc151566g00007 587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 492 IPR027417 -
Stsc151566g00007 587 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 572 IPR044974 GO:0006952
Stsc151566g00007 587 ProSiteProfiles TIR domain profile. 55 222 IPR000157 GO:0007165
Stsc151566g00007 587 PRINTS Disease resistance protein signature 338 352 - -
Stsc151566g00007 587 PRINTS Disease resistance protein signature 258 273 - -
Stsc151566g00007 587 PRINTS Disease resistance protein signature 432 446 - -
Stsc151566g00007 587 Pfam NB-ARC domain 249 460 IPR002182 GO:0043531
Stsc151566g00007 587 SMART till_3 56 194 IPR000157 GO:0007165
Stsc151566g00007 587 Gene3D - 222 393 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151566g00007 Stsc-Chr151566 31811 35395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151566g00007 67 587 WRKY Transcription Factor Family AT4G12020 27.903 3.69e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151566g00007 - - aip:107614521 711.449