Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151566g00003 ATGAGTTCAAGAGATGATAATAACACGCTATTCTCTGCCAAACCTTCACCCGTATCTGCCAATAAATCTAAGAAATCCTCACTTAGGCGGAAATTCAAGGCCCTGCTGGGCTTTCCTAAACCTTCAGATCCAAGCCCGTTGGCCCACCCATACACTGCTTCTGCTTCTACTTCTGCTAACGTCATCATCCAGGCCGCAGCATCTTCATCTCGTCGTACTTGTGTCTTCAAGTATGACGTGTTTCTCAGTTTCAGAGGCACTGATACTCGCAACACTTTCGTTGATCATCTCTACAATAATCTCGTCAAGAAAGGTGTCGTCACTTTTATGGATGACAAGAGGCTCGAGAAGGGAGAACCGATTTCGTCGCAGCTCATTGACGCGATTCGTGATTCGAGGGTTTCAATCGTGGTGTTCTCGAGAGATTATGCTGGTTCTGCATGGTGTTTGGAGGAGATGGCTACCATAGCTGAAAGCGAGAAGGAATTGGGACAGAAGGTTTTCTCCATTTTCTATGATGTGGATCCTTCTCATGTTCGAAAGCAGAGCGGAGTGTATGAAACGGCATTCGCTCTGCATACAGAGAAATTCAGTCCTGGCCGGGTTGCGAGGTGGAAAAGCGCTATGACGAGCTTGGCCAATTCGGTTGGTTGGGATCTCAGAAACAAGCCAGAGTATACAGAAATCAAAGAAATTATTCGAAAGGTAGTGAAAACATTGAACCCCAAATTCTCAGGGTTTGATGATGATCTGGTTGGGATACAGCCTCGTGTAGAAAGGTTAGAAGGGCTTCTAAAATTGAGCTCAAAAGATGATAATCCACGGGTTATCGGAATTTGTGGGATGGGTGGTATAGGAAAAACAACTCATGCTAAGGTCTTATATGACAAAATCTCTTACCAGTTTGATGGTTGTTGTTTTATTGAGAATGTAAGCCAAGGTTACAGAGATGGCGGTGCTGTTATTATTCAAAAGCAAATCCTTAATCAAGCTCTGGACGAACAAAATTTAGAGATGTATAGTCACTTTGAGATATCTGCCATTTTAAGAAATAGGCTGTCTTGCATAAAGGTTCTTATGGTGCTTGACAATGTTGATGAGCTGCAGCAATTGGAGGAATTGGCTATAAGTCCTAAATTACTTGGGAGAGGAAGTAGAATTATCATAGTCACTAGGGATGAGCATATTCTAAAAGTTTATGGAGCAGACAGAGTTGATAAGGTTCCACTATTGGATGACGATGAAGCTCGTGAACTTTTTTTAAGGAAAGCATTGGGAAATGATGGTTCTAGCAGTAGCAAATACATGCATCTAATTCCTAAAATACTGGAATATGCTCAAAATCTTCCATTAGCAGTCAAAGTAGTGGGTTCCTTGTTGCACTCCCGAGATGTTTCCCAGTGGACTGATGCCTTGAAAAGAATGAGGAAAATTCCAAACAAAAATATTATGGACGTGCTTCAGATAAGTTTTGAAGGATTGGAGTTATATGAGAAAGAAATATTTCTACACATTGCTTGTTTCTTTCATGGAGAGAGAGAAGATTATGTAAAACAGATTCTAGATAGTTGTGGACTACATCCACATATTGGAATTCCAATTATTATGGAGAAATCACTCGTAACCATTAGAAATCAAGAGATTCATATGCATGAAATGTTACAAGAATTGGGGAAGAAAATTGTTCAGGAGAAATCCCCAGAAGAACCAGGATCATGGAGTAGATTATGGCTTTATCACGATTTCTACCGTGTATTGACTTCAGCAACGGGATCTTATAATGTTAAAGCCATAGTTTTGGATCAGAAAGGGGATGTTTCCAAATATAGTCAATTGAGGATTGAAGGATTATCAAAAATGATGGGTCTTAAGCTACTCATATTACATTACAAGAATTTTTCAGGAAGTCTTGATTTTCTTTCGGACAACTTGCAATATATTTTGTGGCATGGCTATCCTTTCTCTTCACTACCACTAAATTTTGATCCACATAGTCTTGTTGAACTACATTTGCCTAATAGCAACATCAAATTACTATGGGAAAGCCCGAAGAGTTTCCCATGTTTGAAAAAGATGGATTTGAGCAACTCAAAAGATCTTATGAAGACACCAAATTTTGAATGGATCCCAAATCTCAACTGGCTGGATCTTTCAGGATGCACAAATCTATCACAGGTTCACTCCTCAATTGGAATTCTTACGCAACTTGCATACCTCAATTTGCGTAATTGTAGCAATTTGGTCAGCATTGATCTCAACCCTGAGTACAACTTGTGTTCTTTGAGAGTTCTAAACCTCTCTGGCTGCACGAAACTTGAGAATACCACAGACTTTACAGGGCTGTCAAATCTTGAGTACCTTGACCTTGAAAAATGTACAAGTTTATCCGAAGTTCCTGAATCTATTGGGGCTCTTGTAATGCTTAAGTTCTTCAGTTTGAGAGGGTGCATAAATCTTGTCCAGCTACCTGCTAGTGTCAACAATTTGACATGTCTTCAAAATCTAGATTTACATGACTGCTTTAAACTGATGAATCTTCCGCTAAGACAAATAACCATTTCATCCCCCAATCTAAGATATTTGATATTTTTGGATCTTGGATCCTGCAAGATAAATGTAATTCCTGATGCTATTGGAGATCTAAAGTGCTTAGAAAGACTAAATCTACAAGGAAGCAGAATTCAATCTTTACCTGAAACCATCAAGAGCCTTTCCTGCCTGGCATATTTAAACTTGTCAGATTGCCATGAGCTTGTTGAATTGCATGATCTTCCATTTGAAAGTTCTTCATCGGGGGGAAGGTATTTTAAGAAAGTATCAGCATCTCGTAATCATAGATCGGGATTATATATTTTCAACTGCAGTAAGGTTATGAAATGCCACTGGATGTTAGTTGCAATTTCATGGTTAGCAAGACTTGTTAAGAAACCCTGTCAATTTCGATGTGGTTTTGACATTGTAGTACCTTTTATGAGGACTGAAATTCCAGAATGGTATTTCAATAATCGATTTGAGGGTGACTCAACAATAAGGATAGCTCCCTCTAGTGTAGATGATTGGCTTGGTTTTGCCTTTTGTGCAACATTCGAGGTGAACAAAAATAGTCTAACAAATCCTTGCTCCTCTTCAAAGCTGCCACGTCCTTTGTATCTTTCATTTGAAAGTGAAAACACAGAAGAATGCTTTGACTTTCCAGCTTGTTTAGACATGGAGAAGGAGCATGTTGGTCCAATATCAAGATATTGCTGGATAATCTATATCTCTCGAGCACACTGCCATTTTGTGAAAACAGGAACCCGTGTCACATTTAAAGCATGCCCAGGCTTACAGGTGAAGGAATGGGGTCTACGCATGTTAACCATGGACGATATAGGGTTGATAAGGAGAAACTTCCGCAAAATGAATAGTGAAGGCGATGTTCCTTGGTTTCGTCGTTGTATAGACGAAATCTCTGATCCTAAAATCGATCTTTCCAATGAATATGATATGTTGTATACTGAGGATGAGCATGAGAATGAGAGTAATAATGGATTTCGGCCTAAAATCCAGCTACCCTACAATTGGTATGTAACTGATGAAGAGGAAAAAGAGAATATGGATGCCAAGGCCAAGGAAATTAATTTTTATAATCTTGGCCATTCTTCCATAGTGGAGGTCCAGCAAGTTGTGAATAGCCCTTCTTCCTCACAGGAAGAGGAAAGCATGAACATGAAAGATATATCATTGCAGATAGCCTTTGATCAGGAAAGTGATTGCTCATACATGAGCGATTTATCTCCGAGGTAA 3786 0.3946 MSSRDDNNTLFSAKPSPVSANKSKKSSLRRKFKALLGFPKPSDPSPLAHPYTASASTSANVIIQAAASSSRRTCVFKYDVFLSFRGTDTRNTFVDHLYNNLVKKGVVTFMDDKRLEKGEPISSQLIDAIRDSRVSIVVFSRDYAGSAWCLEEMATIAESEKELGQKVFSIFYDVDPSHVRKQSGVYETAFALHTEKFSPGRVARWKSAMTSLANSVGWDLRNKPEYTEIKEIIRKVVKTLNPKFSGFDDDLVGIQPRVERLEGLLKLSSKDDNPRVIGICGMGGIGKTTHAKVLYDKISYQFDGCCFIENVSQGYRDGGAVIIQKQILNQALDEQNLEMYSHFEISAILRNRLSCIKVLMVLDNVDELQQLEELAISPKLLGRGSRIIIVTRDEHILKVYGADRVDKVPLLDDDEARELFLRKALGNDGSSSSKYMHLIPKILEYAQNLPLAVKVVGSLLHSRDVSQWTDALKRMRKIPNKNIMDVLQISFEGLELYEKEIFLHIACFFHGEREDYVKQILDSCGLHPHIGIPIIMEKSLVTIRNQEIHMHEMLQELGKKIVQEKSPEEPGSWSRLWLYHDFYRVLTSATGSYNVKAIVLDQKGDVSKYSQLRIEGLSKMMGLKLLILHYKNFSGSLDFLSDNLQYILWHGYPFSSLPLNFDPHSLVELHLPNSNIKLLWESPKSFPCLKKMDLSNSKDLMKTPNFEWIPNLNWLDLSGCTNLSQVHSSIGILTQLAYLNLRNCSNLVSIDLNPEYNLCSLRVLNLSGCTKLENTTDFTGLSNLEYLDLEKCTSLSEVPESIGALVMLKFFSLRGCINLVQLPASVNNLTCLQNLDLHDCFKLMNLPLRQITISSPNLRYLIFLDLGSCKINVIPDAIGDLKCLERLNLQGSRIQSLPETIKSLSCLAYLNLSDCHELVELHDLPFESSSSGGRYFKKVSASRNHRSGLYIFNCSKVMKCHWMLVAISWLARLVKKPCQFRCGFDIVVPFMRTEIPEWYFNNRFEGDSTIRIAPSSVDDWLGFAFCATFEVNKNSLTNPCSSSKLPRPLYLSFESENTEECFDFPACLDMEKEHVGPISRYCWIIYISRAHCHFVKTGTRVTFKACPGLQVKEWGLRMLTMDDIGLIRRNFRKMNSEGDVPWFRRCIDEISDPKIDLSNEYDMLYTEDEHENESNNGFRPKIQLPYNWYVTDEEEKENMDAKAKEINFYNLGHSSIVEVQQVVNSPSSSQEEESMNMKDISLQIAFDQESDCSYMSDLSPR 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151566g00003 1261 ProSiteProfiles TIR domain profile. 76 240 IPR000157 GO:0007165
Stsc151566g00003 1261 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 78 750 IPR044974 GO:0006952
Stsc151566g00003 1261 Gene3D Ribonuclease Inhibitor 774 961 IPR032675 -
Stsc151566g00003 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 505 IPR027417 -
Stsc151566g00003 1261 MobiDBLite consensus disorder prediction 1 27 - -
Stsc151566g00003 1261 Pfam C-JID domain 991 1124 IPR045344 -
Stsc151566g00003 1261 SMART till_3 77 215 IPR000157 GO:0007165
Stsc151566g00003 1261 FunFam Disease resistance protein (TIR-NBS-LRR class) 75 242 - -
Stsc151566g00003 1261 SUPERFAMILY L domain-like 617 952 - -
Stsc151566g00003 1261 PRINTS Disease resistance protein signature 276 291 - -
Stsc151566g00003 1261 PRINTS Disease resistance protein signature 756 772 - -
Stsc151566g00003 1261 PRINTS Disease resistance protein signature 352 366 - -
Stsc151566g00003 1261 PRINTS Disease resistance protein signature 446 460 - -
Stsc151566g00003 1261 Pfam NB-ARC domain 266 477 IPR002182 GO:0043531
Stsc151566g00003 1261 Gene3D Ribonuclease Inhibitor 607 773 IPR032675 -
Stsc151566g00003 1261 SUPERFAMILY Toll/Interleukin receptor TIR domain 68 218 IPR035897 -
Stsc151566g00003 1261 Pfam TIR domain 77 243 IPR000157 GO:0007165
Stsc151566g00003 1261 Gene3D - 75 246 IPR035897 -
Stsc151566g00003 1261 MobiDBLite consensus disorder prediction 1 23 - -
Stsc151566g00003 1261 Gene3D - 410 495 IPR042197 -
Stsc151566g00003 1261 SUPERFAMILY "Winged helix" DNA-binding domain 482 586 IPR036390 -
Stsc151566g00003 1261 Gene3D - 247 404 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151566g00003 Stsc-Chr151566 10612 15703 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151566g00003 761 923 WRKY Transcription Factor Family AT4G12020 37.805 1.15e-13 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151566g00003 - - adu:107462392 1247.65