Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151566g00001 ATGTACCGTAGAATCAACACCCGACCATTATACGTGGCTGACCCGGAGGATCAGGATAACGAGCCCGAGCCCGCGTCTGAAGCTGGGCCTGCTTCTCCTTCCTCCGGTGATGACACAAAATTTGAAGCACCATCACCTAAGAAAAGGAGGGAGATGAAGAAGAGAGTGGTCACAATACCGATCGGTGACGTGGACGGATCTAAGACCAAAGGAGAATCATATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGTTCGCCTTACCCAAGGGGATATTACCGATGCAGCAGCTCAAAAGGGTGCCCCGCGAGGAAGCAAGTTGAACGAAGCCGCATGGACCCCACCAAGCTCATGGTCACCTACAACTACGAACACAACCACTCTCTTCCGCTAACCAAATCCCACTCCTCCTCCTCTTCCTCCTCCTCCGCCACCGTTAACGCCATAACCAACGCCGTCACTGAAGTCGCTGTCGCCTCCTCTCCCTCCGAGTCCGCCGCTGGTTTCCCGCCGGAAGATCTGACGGTATTCTCCAGCCACGTCGATCTCGACCTCGCCGGCGACTCCGCAGTACTTCTCTGCCACCACAACCACCACGGATTCGGGTGGTTCGACGACGTGGCCTCTGCCGGCGGCGTCCTGGAGAGTCCGATCTGCGGCGGCATGGATGACATGGCGCTGACGGCGGAGGAGGATGACGAAGAAGAATCGCTGTTCGCCGGCCTCGGCGAGCTGCCGGAGTGCTCGGCTGTTTTCCGGCGGAGGAATATTCCGCGTGCCAACGCGATCCAGTGCGGTGGCATTACAGGATAA 834 0.5815 MYRRINTRPLYVADPEDQDNEPEPASEAGPASPSSGDDTKFEAPSPKKRREMKKRVVTIPIGDVDGSKTKGESYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRMDPTKLMVTYNYEHNHSLPLTKSHSSSSSSSSATVNAITNAVTEVAVASSPSESAAGFPPEDLTVFSSHVDLDLAGDSAVLLCHHNHHGFGWFDDVASAGGVLESPICGGMDDMALTAEEDDEEESLFAGLGELPECSAVFRRRNIPRANAIQCGGITG 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151566g00001 277 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151566g00001 277 FunFam WRKY transcription factor 65 63 137 - -
Stsc151566g00001 277 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151566g00001 277 Gene3D WRKY domain 63 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151566g00001 277 MobiDBLite consensus disorder prediction 1 80 - -
Stsc151566g00001 277 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 257 IPR044810 GO:0003700
Stsc151566g00001 277 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151566g00001 277 SUPERFAMILY WRKY DNA-binding domain 72 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151566g00001 Stsc-Chr151566 3125 6133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151566g00001 1 264 WRKY Transcription Factor Family AT3G58710 47.368 1.32e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151566g00001 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151566g00001 - - ahf:112707218 487.648