Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151565g00006 AGGTTTAATCTGAAGCTACACACAGCAGGAATCATTGCAGCAACATTTGGAATGGCAAACTTAGTAGCTCGTCCATTTGGTGGATACACATCAGATGTTGCAGCAAGATTGTTTGGCATGAGGGGAAGGCTATGGAACCTATGGATCCTCCAAACCCTAGGTGGTGTGTTCTGCATATGGCTCGGCCGTGCCAACTCTCTCCCTATAGCTATCTTATCCATGATCCTCTTCTCAGTTGGAGCACAAGCCGCATGCGGCGCCACCTTCGGCATCATCCCTTTCATCTCAAGAAGATCCCTTGGAATCATCTCAGGTCTAACCGGAGCCGGTGGAAACTTCGGCTCCGGTTTGACTCAGCTGGTTTTCTTCTCAACCAACCGGTTCTCCACCTCGGCCGGGCTGTCGTGGATGGGGGCTATGATTGTGGCGTGCACTTTGCCGGTGACTCTGGTTCATTTTCCTCAGTGGGGAAGCATGTTTCTTCCTCCTTCAAAAGATGTGCAGAAAAGCACTGAAGAATATTATTACACTTCTGAATGGAATGAAGAAGAGAAGCAGAAGGGTTTGCATCAGGGAAGTCTTAAGTTTGCTGAGAATAGCAGATCAGAGAGGGGGAAGCGTGTTGCATCTGCACCAACTCCACCCAACACTACTCCTACCCATGATAACAATAATGTCTGA 681 0.4875 RFNLKLHTAGIIAATFGMANLVARPFGGYTSDVAARLFGMRGRLWNLWILQTLGGVFCIWLGRANSLPIAILSMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTNRFSTSAGLSWMGAMIVACTLPVTLVHFPQWGSMFLPPSKDVQKSTEEYYYTSEWNEEEKQKGLHQGSLKFAENSRSERGKRVASAPTPPNTTPTHDNNNV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151565g00006 226 Gene3D MFS general substrate transporter like domains 1 159 IPR036259 -
Stsc151565g00006 226 FunFam Nitrate transporter 2.1 1 158 - -
Stsc151565g00006 226 MobiDBLite consensus disorder prediction 182 226 - -
Stsc151565g00006 226 MobiDBLite consensus disorder prediction 211 226 - -
Stsc151565g00006 226 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 208 IPR044772 GO:0015112
Stsc151565g00006 226 MobiDBLite consensus disorder prediction 182 205 - -
Stsc151565g00006 226 SUPERFAMILY MFS general substrate transporter 2 152 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151565g00006 Stsc-Chr151565 36064 37179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151565g00006 1 221 Inorganic Solute Cotransporters AT5G60770 78.733 3.18e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151565g00006 K02575 - gmx:100807710 405.986