Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151561g00008 ATGTCACCAACATCATCATCATCCCAACTATGCTCTATTCTTCTCCCACCTTCGCTTTGTTTTGAATCACTCAACCTTCATCTCTTCCTTGCTTTCCTACTACTATTTGTTGCCTTCAACTTTTGGTTAGTCCCTGGTGGTCTTGCTTGGGCTCTCTCCAAGGCCCGGTTTTTCCAACCTTCACATGATAAGGACTACAACCAGGACGACCATAAAGCTTCGATTCCTGGACCTTCTGGTCTTCCGGTTCTTGGCCTTGTTTCGGCCTTTACTGGAACCCTAACTCATAGGGTTTTGGCGAACTTGGCTGAAACATTCAAGGCCAAGAACTTGATGGCATTTTCTATTGGCTTCACTCGTTTTATTATCTCCACAAACCCTAACACTGCCAAAGAGATTCTCAACAGCTCAGCTTTCGCTGATCGACCTATTAAAGAATCAGCTTACGAGCTTCTCTTCCACCGTGCAATGGGGTTCGCTCCTTACGGAGAGTACTGGAGGAATCTCAGGAGAATCTCAACAACTCATTTGTTCTCTCCGCGGAGGATCATTGCCACCGGTGAGTATAGAGCTAGAGTGGGTGCCAACATGGTGAAAGAGATAGTTGGTTTGATGGAGAAGAAGGGTGAGGTTAAGGTTAGGGAGGTGTTGCATTTAGGGTCCTTAAACAATGTAATGCTGAGTGTGTTTGGGAAAAGCTATGAGTTTGGTGAAGGTGGTAATGGGTGTGAGCTTGAAGGGTTGGTGAGAGAAGGGTATGATCTTCTTGGGGCTTTCAATTGGAGTGACCACTTCCCTTTATTGGGTTGGTTGGACTTGCAAGGTGTGAGGAAGAGGTGTAGGAATCTTGTAATGAAAGTGGATGATTTTGTTGGGAATATCATCTCAGAACATAGAATGAAAAGGGTTAATGATGAAAAGAAGAATGTTTCTAACGAAGAAGAAAGCTTAGATGACTTTGTTGATGTGTTACTAAGTTTGGAAAAACAGAGCAAGCTTCAACACTCAGATATGGTTGCTGTTCTTTGGGAAATGATCTTTAGGGGGACTGATACAGTGGCTATTTTGTTGGAATGGATTCTTGCAAGGATGGTAATGCACCCTGAAATCCAAGCCAAAGCTCAATCTGAAATTGACTCTGTAGTTGGTTATGACCGTACAATCAACGATTTAGACCTTCAAGATCTGCCATACCTACGTGCCATAGTGAAAGAAGCCCTAAGGATGCACCCACCAGGCCCACTGCTATCATGGGCCAGGCTTGCAATCCACGACACACAAGTGGGCCCCCACTTCATTCCAGCTGGCACAACAGCAATGGTGAACATGTGGGCCATCACGCATGACAAGGATGTTTGGTGTGACCCAAATGAGTTCAAGCCAGAGAGGTTCATAGAAGAAGAGGTTCAAATAATGGGGTCTGATCTTAGGATTGCACCGTTTGGTTCTGGAAGAAGGGTGTGTCCTGGAAAGGCTATGGGCTTGGCCACTGCTGAGCTTTGGCTTGGTATTTTGCTTCAAAGGTTCCAATGGATGGATAGAAATGGTGGTGGTGTTGATTTGTCTGAGTGCTTGAAGCTTTCTCTTGAGATGAAATCCCCTCTTCTTGCTAAGGCTATTCCAAGATTTGATGTTGTTGGTTAA 1644 0.4489 MSPTSSSSQLCSILLPPSLCFESLNLHLFLAFLLLFVAFNFWLVPGGLAWALSKARFFQPSHDKDYNQDDHKASIPGPSGLPVLGLVSAFTGTLTHRVLANLAETFKAKNLMAFSIGFTRFIISTNPNTAKEILNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISTTHLFSPRRIIATGEYRARVGANMVKEIVGLMEKKGEVKVREVLHLGSLNNVMLSVFGKSYEFGEGGNGCELEGLVREGYDLLGAFNWSDHFPLLGWLDLQGVRKRCRNLVMKVDDFVGNIISEHRMKRVNDEKKNVSNEEESLDDFVDVLLSLEKQSKLQHSDMVAVLWEMIFRGTDTVAILLEWILARMVMHPEIQAKAQSEIDSVVGYDRTINDLDLQDLPYLRAIVKEALRMHPPGPLLSWARLAIHDTQVGPHFIPAGTTAMVNMWAITHDKDVWCDPNEFKPERFIEEEVQIMGSDLRIAPFGSGRRVCPGKAMGLATAELWLGILLQRFQWMDRNGGGVDLSECLKLSLEMKSPLLAKAIPRFDVVG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151561g00008 547 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 FunFam Cytochrome P450 78A5 67 542 - -
Stsc151561g00008 547 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS E-class P450 group I signature 442 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS E-class P450 group I signature 400 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 SUPERFAMILY Cytochrome P450 75 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 CDD CYP78 107 535 - -
Stsc151561g00008 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Stsc151561g00008 547 PANTHER CYTOCHROME P450 78A7-RELATED 25 542 - -
Stsc151561g00008 547 Pfam Cytochrome P450 76 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151561g00008 547 Gene3D Cytochrome P450 65 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151561g00008 Stsc-Chr151561 27016 29068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151561g00008 25 542 Cytochrome P450 AT1G74110 64.906 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151561g00008 K20619 - gmx:100811042 746.117