Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151561g00005 ATGGAGCTTCTTTGGTTACCAACCAGAACCAGTGGATCTGTTGTAGCAACCTTACTCCTGTTACTGTTCTCTTGCACCATATTCACTTCCACAGAAGCTTATGATTCACTTGATCCAACTGCCAATATAACAATCAAATGGGATATCATAACTTGGACTGGAGATGGCTATGTAGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCATATCCAAGCACCTGGATGGACCTTAGGGTGGACATGGGCTAAAAGGGAAGTAATTTGGAACATGCTTGGGGGCCAAACCACAGAACAAGGGGATTGTTCAAGGTTCAAAGGAAGCATCCCGCATTGCTGCAAGAAAGATCCATCTGTAGTGGATTTACTGCCAGGAGCACCTTACAATCAGCAGGTAGCGAATTGCTGCAAAGGCGGCGTCTTGAATGCTTGGGCTCAGGACCCTGAAACTGCTGTTGCTTCGTTCCAGCTCATTGTCGGTTCGGCTGGAACAACTAACAAAACGGTTAGAGTGCCTAAAAATTTCACCTTGAAAGCACCCGGTCCGGGTTATACTTGTGGCCCTGCAAAGATTGTGAGGCCAACAAAATTTAGTACTAATGACAAGAGGAGAACCACTCAGGCCATGATGACTTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACTCCAACTTGCTGCGTTTCGCTCTCATCCTTCTATAATAATACAATAGTCAACTGCCCAACTTGTACCTGTGGCTGTCAAAACAAAAGAGAACCTGGAAGTTGTGTAGATCCAAAGTCTCCGCATTTAGCTTCAGTTGTTTCACCACCAAGCAGAGCCTTGAATCCACCTCTAGTCCAGTGTACAAGCCATATGTGTCCGATTCGAGTGCACTGGCATGTCAAGCTTCAATACAAAGAGTACTGGAGGATCAAGATCACAGTCACAAATTTCAATTACAGAATGAACTATTCGAATTGGAACCTTGTTGTGCAGCATCCCAATTTTGACAATGTGACACAGGTTTTCAGCTTTAACTACAAGCCACTCACACCTTATGAAGGCTTAAATGATACCGGTATGCTGTGGGGTGTGAAGTTCTACAATGATTTGTTGGTATCAGCTGGAGCAATTGGGAATGTGCAATCAGAACTGTTATTTAGGAAAGACAAATCAAGCTTCACATTTGATAAAGGATGGGCATTCCCAAGAAGGATCTATTTCAATGGAGACAACTGTGTGATGCCACCTCCAGATGCATACCCTTGGCTACCAAATGCAAGTTCAAGACTAGTTCTCTCTTTGCTAGGTGCTCTCACTGGGATTCTGGCTTCTTTTCTAGTTTTGTAA 1347 0.4373 MELLWLPTRTSGSVVATLLLLLFSCTIFTSTEAYDSLDPTANITIKWDIITWTGDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKREVIWNMLGGQTTEQGDCSRFKGSIPHCCKKDPSVVDLLPGAPYNQQVANCCKGGVLNAWAQDPETAVASFQLIVGSAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVRPTKFSTNDKRRTTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCTCGCQNKREPGSCVDPKSPHLASVVSPPSRALNPPLVQCTSHMCPIRVHWHVKLQYKEYWRIKITVTNFNYRMNYSNWNLVVQHPNFDNVTQVFSFNYKPLTPYEGLNDTGMLWGVKFYNDLLVSAGAIGNVQSELLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRLVLSLLGALTGILASFLVL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151561g00005 448 PIRSF COBRA 8 448 IPR006918 GO:0010215|GO:0016020
Stsc151561g00005 448 PANTHER PROTEIN COBRA 22 433 IPR006918 GO:0010215|GO:0016020
Stsc151561g00005 448 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151561g00005 Stsc-Chr151561 10104 12576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151561g00005 19 446 COBRA Gene Family AT3G02210 76.744 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151561g00005 - - gmx:100811581 830.091