Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151554g00004 ATGGGTTTTCGTTTACCTGTTATTCGAAGGACATCATCGTTCTCAGGTAGCCAAGGAGCTTCAAAATCTTTAGAAGTCCCAAAAGGGTATCTTGCAGTGTATGTTGGGGAGAACCAGAAGCGGTTTGTGATTCCTGTATCATACTTGAACCATCCTTCATTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTCAGCATTCCTTGCAGTGAACAT 243 0.4362 MGFRLPVIRRTSSFSGSQGASKSLEVPKGYLAVYVGENQKRFVIPVSYLNHPSFQDLLSQAEEEFGYDHPMGGLSIPCSEH 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151554g00004 81 Pfam Auxin responsive protein 13 80 IPR003676 GO:0009733
Stsc151554g00004 81 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 21 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151554g00004 Stsc-Chr151554 34583 34825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151554g00004 25 78 Calmodulin-binding Proteins AT3G43120 59.259 2.67e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151554g00004 - K14488 gmx:106794448 134.42