Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151554g00003 ATGGGTTTCTACATTCCAAGTATTAGAAAGGCATCATCTTCTGCAGCCCCGATACGCTATCTCGCCGTCTACATTGGAGAGAATATGAGGCGTGTTTTGAGTGCTAAGCACATTCTTCGCCGGCAAGTTTCCGCGACATCAATGGAAGTTCCTAAGGGATACTTTGCAGTGTATGTAGGCGAGGGAGAAAAGAAGAGATTCGTGATACCTGTATCGGTTTTGAATCAACCTTCATTTCAAGAACTACTTAGCATAGCAGAGAATGAATTTGGATTCAGCCATCCAATGGGGGGACTCACAATTCCATGCTCAGAAGATGTTTTCATGAGTCTCACATCAACCTTATGCTAG 351 0.4387 MGFYIPSIRKASSSAAPIRYLAVYIGENMRRVLSAKHILRRQVSATSMEVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAENEFGFSHPMGGLTIPCSEDVFMSLTSTLC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151554g00003 116 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 36 115 IPR003676 GO:0009733
Stsc151554g00003 116 Pfam Auxin responsive protein 42 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151554g00003 Stsc-Chr151554 32259 33769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151554g00003 49 111 Calmodulin-binding Proteins AT3G43120 52.381 3.41e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151554g00003 K14488 - gmx:100797800 142.124