Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151554g00001 ATGGGGTTGAGAAAATCAAACAAGATTTCACAAAGTGCCGTTATAAAGCAAATTATGAAGAGGTGTTCAAGCTTAGGGAAGAAGAATAATAATAATAACGGATATGATAGTAACAACAATAATTATGAGCAGCATCCACTTCCTCTTGATGTTCCAAAAGGGCATTTTGCTGTTTATGTTGGTGAGAATAGAACAAGGTACATTGTTCCTATTTCCTTGTTGGGTAATCCTGAGTTTCAATGCCTTCTTCGTCAAGCTGAAGAAGAATTCGGGTTTGAACATGATATGGGTCTCACTATCCCTTGTGAAGAAGTTGTTTTCCTCTCCTTAACTACTTCACTCCTCAGATAA 351 0.3704 MGLRKSNKISQSAVIKQIMKRCSSLGKKNNNNNGYDSNNNNYEQHPLPLDVPKGHFAVYVGENRTRYIVPISLLGNPEFQCLLRQAEEEFGFEHDMGLTIPCEEVVFLSLTTSLLR 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151554g00001 116 Pfam Auxin responsive protein 36 113 IPR003676 GO:0009733
Stsc151554g00001 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151554g00001 Stsc-Chr151554 12973 13323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151554g00001 1 107 Calmodulin-binding Proteins AT3G43120 39.091 2.12e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151554g00001 K14488 - mof:131156419 166.777