Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151547g00003 ATGTCATCAGAAGAAGTAGTGGTTTTGGGCGATGATGAAAATAAAGAGCAAAACCATCAAGCTTCTGACCATCATCATGGTGGCCTCATTGGAAAGAAGAAGTTATCAAGAAGATACGATTCTCTTGATATGGAATCTCGCATCTTCCCAAATTCTTCTGCCCACTCTAAAGGACCATCGATGTCAATGATTATGCATCTAGCGTTTCAAAGCATAGGAATTGTGTATGGAGACATAGGGACATCACCATTGTATGTTTATTCAAGCACTTTCACTGATGGCATAAAGCACAATGATGATATTTTGGGTGTTCTTTCTATCATCCTTTACACTATTACCCTCATTCCTCTTATCAAATATGTCCTCATCGTCTTAAGGGCAAACGATAATGGAGATGGAGGGACATTCGCTTTGTACTCTCTAATTTGCCGCTATGCGAAAGTTAGTCTTACTCCAAATCAACAAATTGAAGATGCAGAAGTTTCTAATTATCAATTAGATTTGCCTAATAGCAGCACAAAGAGGGCTTCAATTGTTAAGTCAAAGCTTGAGAACAGTTACTTTGCAAAGCTCTTCTTGTTGCTTGTCACCATGCTTGGTACCTCCATGGTCATTGGGGATGGTGTACTCACTCCTTGCATATCTGTTTTATCTGCTGTGGGAGGGCTCAAGGAAGCTACTTCAAAAATAACTGACGGAATCTTGATATGCCTATTCATGGTTCAAAGGTTTGGAACAGATAAAGTTGGGTACAGTTTTGCACCAATTATATGTGTTTGGTTTGTGTTTATTGGAGGGATTGGTGTATACAATTTCATCAAGTATGATCCCACTGTTATCAAAGCAATAAATCCAGCATACATTGTTTACTATTTTCGGAGGAACAAGAAAGATGCTTGGATTTCTCTTGGGGGCTCCGTCCTTGCCATAACAGGAACTGAAGCCCTATTTGCGGATGTTGGACATTTCACAGTGAGATCAATACAAATAAGCATGTGCTCTGTGACATACCCTGCCCTAATTCTGGCTTATACTGGACAAGCTTCATTCCTTCGCAAACACAATGATCTTGTTTCCGATACTTTCTATAAGTCCATACCACATAAATTGTATTGGCCAATGTTTGTGGTTGCTGTGGCAGCAGCAATAATAGCATCACAAGCGATGATATCAGGAACATTCTCGATCATACAACAATCCTTAGCACTTGGATGCTTCCCTCGTGTCAAAGTTGTACACACATCAGCCAAGTATGAAGGACAAGTTTACATTCCTGAAATCAATTTCATGCTCATGATTGCATGTGTTGCTGTCACTGCTGGATTCAAAACCACCACCAAAATTGGCAATGCTTATGGAATAGCAGTGGTGTTTGTAATGACACTTACTTCAGCTTTCCTTGTTCTAGTTATGATCATGATATGGAAGACAAACATAGTACTAATTAAGCTATGTTCTTATCATTGGAAAAAGTACTATTATGAATTGGATCATAAGATTTCTCCGAAAAGGCTTAAGGAAATTATATCTAATGACAAAAAGTTGTATAGAATTCCTGGATTCGCCATATTCTACTCGGAACTTGTTCAAGGGATTCCACCAATTTTCAAGCATTATGTGTCGAATGTTCCAGCATTACATTCGATTGTCGTGTTTATCTCGATCAAATCGTTGCCGGTTAGCAAGGTTTCAATTGATGAGAGGTTCATTTTTCGCCGAGTTGAACACGAAGAACTTAAGGTGTTCAGATGTGTTGTGAGATATGGATACACCGATGTACTCGACGAGAAAGAGCCGTTGGAGGAGTTGTTAGTTAGAAGGTTGAAGTCATTTGTTGTTGGTGATAGGGTTTTTGATTCATCATCACAAAAAGTGGTAACCCATGAAGAAGAAAAAACTGAAGAGGAGAAAATGGGTGATAATGGTGGTGGTGATGAGACTATTGAGGCAATTGAGAAAGCATTGGAAGCTGGAATTGTTCATTTGATTGGTGAGAGTGAAGTTGTTGCTAGCAAAGGAAGTGGCATAGGGAAGAAGTTTTTGATAAATTATGCTTACAATTTCTTGAAAAAGAATTTGAGGCAAAGTGACAAAGTGTTTGATATTCCTCATGAGCGTATGGTTAAGGTGGGAATGACTTATGAACTTTAA 2151 0.3877 MSSEEVVVLGDDENKEQNHQASDHHHGGLIGKKKLSRRYDSLDMESRIFPNSSAHSKGPSMSMIMHLAFQSIGIVYGDIGTSPLYVYSSTFTDGIKHNDDILGVLSIILYTITLIPLIKYVLIVLRANDNGDGGTFALYSLICRYAKVSLTPNQQIEDAEVSNYQLDLPNSSTKRASIVKSKLENSYFAKLFLLLVTMLGTSMVIGDGVLTPCISVLSAVGGLKEATSKITDGILICLFMVQRFGTDKVGYSFAPIICVWFVFIGGIGVYNFIKYDPTVIKAINPAYIVYYFRRNKKDAWISLGGSVLAITGTEALFADVGHFTVRSIQISMCSVTYPALILAYTGQASFLRKHNDLVSDTFYKSIPHKLYWPMFVVAVAAAIIASQAMISGTFSIIQQSLALGCFPRVKVVHTSAKYEGQVYIPEINFMLMIACVAVTAGFKTTTKIGNAYGIAVVFVMTLTSAFLVLVMIMIWKTNIVLIKLCSYHWKKYYYELDHKISPKRLKEIISNDKKLYRIPGFAIFYSELVQGIPPIFKHYVSNVPALHSIVVFISIKSLPVSKVSIDERFIFRRVEHEELKVFRCVVRYGYTDVLDEKEPLEELLVRRLKSFVVGDRVFDSSSQKVVTHEEEKTEEEKMGDNGGGDETIEAIEKALEAGIVHLIGESEVVASKGSGIGKKFLINYAYNFLKKNLRQSDKVFDIPHERMVKVGMTYEL 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151547g00003 716 MobiDBLite consensus disorder prediction 624 645 - -
Stsc151547g00003 716 MobiDBLite consensus disorder prediction 1 29 - -
Stsc151547g00003 716 NCBIfam potassium uptake protein 67 483 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc151547g00003 716 Pfam K+ potassium transporter 68 483 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc151547g00003 716 Pfam K+ potassium transporter 490 592 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc151547g00003 716 MobiDBLite consensus disorder prediction 8 29 - -
Stsc151547g00003 716 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 60 484 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151547g00003 Stsc-Chr151547 30003 35176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151547g00003 1 716 Inorganic Solute Cotransporters AT4G13420 51.641 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151547g00003 K03549 - qsa:O6P43_010741 986.867