Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151541g00003 ATGGAACTTAAGATGGCTAACATGAGCAGCATCAAGATCTCTTCCGATGGAGCGTGGCAGGGTGATAACCCTCTCAACTATGCTTTTCCATTGTTGATCATTCAAACCACCTTAGTCCTCTTCGTTAGCCGCACCTTGACCTTCCTTCTCAAACCTCTTCGTCAACCCAAAGTTGTTGCTGAGATTCTTGGTGGAATATTGCTAGGACCATCTGCAATTGGGCGTAACAAACATTTCATGAAGCTGGTGTTCCCATCATGGAGCACTCCAATACTTGAATCAGTGGCCAGCATTGGCCTCCTTTTCTTCCTCTTTCTTGTGGGAATCGAGCTTGATATTCGAACAATTCGCCGCAGCGGCAAGAGAGCTTTTAGCATTGCCGTTGCCGGAATATCCCTTCCCTTCCTCTTAGCCATGGGAGTAACATTCCTCCTCCAGAAAGCCATCCACTTTGGAGCGGGCCACAGCTACCTGCAACACCTCATGTTCATGGGAGTCTCCCTCTCCATCACAGCTTTTCCTGTGCTGGCACGCATCTTAGCGGAGCTCAAGCTCCTCACCACACAAATAGGGGAAACCGCCATGGCTGCTGCCGCTTTCAATGATATTGCCGCCTGGGTCCTGTTGGCCTTGGCCGTCGCCTTGGCCGGTGGACAACACAAAACCTCCCCACTCACATCCATTTGGGTTCTCATCTCAGGGGTGGTGTTTGTTGCTTTCATGTTGATGGTTGTGAGACCATTCATGAACTGGGTAGCACGCCAATGGTCACAACAACACCAAGTTATTGACGAAGTCTACATATCGTTAACCCTTGCGGGAGTTATGATTGCGGGCTTCGTCACTGACTTCATAGGAATACACTCAATCTTCGGAGCGTTCGTTTTCGGGATCACGATCCCGAAGAAGGGCGAGTTTGCAAGCAGCGTCACAAAGAGGATCGAGGACTTTGTGTCTGCTCTGTTGCTTCCGTTGTACTTCGCCTCGAGCGGGTTGAAAACCGACGTGGCTAAGTTGCATGGGATGGAGGAGTGGGGGCTTCTGGTTCTGGTTATTGCGACGGCGTGCGTGGGGAAGATCTTGGGGACATTTACGGTGGCCATGATGAGCATGATACCCGTGAGGGAATCTCTAACTCTTGGATTCTTGATGAACACCAAAGGTTTGGTGGAGCTTATTGTTCTCAACATCGGCAAAGAGAAAAAGGTACTTAACGACGAGGTGTTTGCGATCCTTGTGCTAATGGCTCTGTTCACCACCTTCATTACAACCCCAATAGTCTTAGCCATATACCGCCCTTCGCGTCTGCGTGCTCCCAACCACCAACCAAAACACCCAACACCCAGACCACTCGCACTCTCATCGCAACATGACCTCACCATCCTTGCCTGCGTCCACGACCACCACACTTCCAACATTCCCTCTCTCATTACTTTCATTGAATCCATTCGACCACATAACATTACCACCAAACTCAACTTTTACGTTATGAAACTCGTCGAGCTCACTGATCGCTCCACCTCCATCTTGACCGTTCAACGCAACCGCCGGAACGGCTTCCCCATCGTCAAAAGAAGGTCACAAAGCTCCATGCACGACCAAGTTGCGGCTGCCTTCCAAGTTTACAACGGTGTGGGCCAGGTCAGATTGCATCATTTGACGTCGGTGTCGGCGCTGTCTACGATGCACGAGGACATATGCCATGTTGCTGAGAAGCAGGGAGTGGGAATGATCGTAATTCCATTCCATAAAAGGTGGAGGAGAGGGGAAGAAGACGAAGATGATAAAGAAATTGAGATAGGTCAAGGGTGGAGAGGGGTCAACCAAAGGGTGCTTCAAACCGCACCGTGCTCCGTGGCGGTGCTCGTAGACCGTGGGGTTGGTACATGGCTTCAGCCAGGTGCAAGTGATGCAACCATGAGGGTTTGCATAGTTTTCATTGGTGGATTGCATGATCGTATGGCTTTAGATTTGGGTGCAAGGATGGCACAACATCCAGCAATAACGTTGTCTCTCGTGAGGTTCATGTCAACAGAGGATAGACAATTGGACTGGGAAACAGAGAAGGAGCTAGACGAGGTGGCAGTAAATGAGTTGAGAGCAAAATTTGGGGAGTCAGTGAAGTACATTGAGAAGGACGCAAGCAACATAACAGATGAGGTGTTGAGAATGGGAAAATCTAAGGAGTATGAGTTACTGATTGTGGGGAAAGGAAATCAGCTTCTTCCGGAGTCATCAATGGAAGATTCTCGACTCGAGCATGCTGAGCTGGGGCGCATTGGAAATCTGTTAACCTCCTCAGGACTGGGTATTACAAGCTCTGTGCTGGTTATACAAGACCAGCAATTGGCAACTTCGAATGAAACCGAACTCAGGAAGATGGCTAGTGTCTTGTGA 2397 0.496 MELKMANMSSIKISSDGAWQGDNPLNYAFPLLIIQTTLVLFVSRTLTFLLKPLRQPKVVAEILGGILLGPSAIGRNKHFMKLVFPSWSTPILESVASIGLLFFLFLVGIELDIRTIRRSGKRAFSIAVAGISLPFLLAMGVTFLLQKAIHFGAGHSYLQHLMFMGVSLSITAFPVLARILAELKLLTTQIGETAMAAAAFNDIAAWVLLALAVALAGGQHKTSPLTSIWVLISGVVFVAFMLMVVRPFMNWVARQWSQQHQVIDEVYISLTLAGVMIAGFVTDFIGIHSIFGAFVFGITIPKKGEFASSVTKRIEDFVSALLLPLYFASSGLKTDVAKLHGMEEWGLLVLVIATACVGKILGTFTVAMMSMIPVRESLTLGFLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPIVLAIYRPSRLRAPNHQPKHPTPRPLALSSQHDLTILACVHDHHTSNIPSLITFIESIRPHNITTKLNFYVMKLVELTDRSTSILTVQRNRRNGFPIVKRRSQSSMHDQVAAAFQVYNGVGQVRLHHLTSVSALSTMHEDICHVAEKQGVGMIVIPFHKRWRRGEEDEDDKEIEIGQGWRGVNQRVLQTAPCSVAVLVDRGVGTWLQPGASDATMRVCIVFIGGLHDRMALDLGARMAQHPAITLSLVRFMSTEDRQLDWETEKELDEVAVNELRAKFGESVKYIEKDASNITDEVLRMGKSKEYELLIVGKGNQLLPESSMEDSRLEHAELGRIGNLLTSSGLGITSSVLVIQDQQLATSNETELRKMASVL 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151541g00003 798 Gene3D - 451 762 - -
Stsc151541g00003 798 FunFam Cation/H(+) antiporter 15 31 438 - -
Stsc151541g00003 798 Gene3D - 31 437 IPR038770 -
Stsc151541g00003 798 Pfam Sodium/hydrogen exchanger family 38 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc151541g00003 798 PANTHER CATION/H + ANTIPORTER 8 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151541g00003 Stsc-Chr151541 21599 26944 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151541g00003 79 796 Antiporter Super Family AT3G53720 54.439 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151541g00003 K26731 - gmx:100799165 951.814