Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151541g00001 ATGGCCCCCAACATAACCTCCATAAAAACATCCTCCAGTGGAGCGTGGCAAGGCGACAATCCCTTAGACTTCGCCTTCCCCCTCCTCATAGTCCAAACCACTCTCATCCTTATCGTCACCCGCATCCTCGCTTTCTTCTTCAAACCCCTCCGCCAGCCCAAAGTCATTGCTGAAATTGTCGGTGGGATTGTGCTTGGACCATCGGCATTGGGGAGGAGCAAAGCCTACCTGAACAGGCTGTTCCCATCATGGAGCACTCCAATACTCGAATCAGTTGCCAGCATTGGCCTCTTGTTCTTCCTCTTCCTTGTAGGCCTCGAGCTCGACCTCAACTCAATCCGCCGCAGTGGCCGCCGCGCATTCGGCATCGCCGCCGCCGGAATCTCTCTTCCCTTCATCAGCGGTATTGGCGTCGCCTTCATCCTCCGAAAGACCGTCGACGGAGCCGACAAAGTCGGCTACGGTCAGTTCCTCGTCTTCATGGGCGTCGCCCTCTCCATAACCGCCTTTCCCGTCCTCGCTCGAATCCTCGCAGAGCTCAAGCTCCTCACCACGCCTGTCGGCGAGACAGCCATGGCCGCCGCCGCCTTCAACGACGTCGCAGCCTGGATACTCCTCGCACTGGCCGTAGCACTCGCCGGAAACGCCGACGGTAGCCACAAGAGTCCACTGGTGTCGGTGTGGGTTCTCCTGTCTGGCGCGGCGTTCGTGATCTTCATGATGACGGTTATCCGACCGGCGATGAAGCTGGTGGCACGACGGTGCTCGGCGGAGCACGATGCGGTGGACGAAGCGTACATCTGCTTAACCCTGGCGGGAGTGATGGTATCAGGATTCTTGACGGACCTGATCGGGATCCACTCGATCTTCGGGGCGTTCGTGTTCGGATTAACGATTCCGAAGGGAGGGGATTTCGCGGAGAGGCTGATTGAGAGGATCGAGGATTTCGTTTCAGGGCTGCTGCTGCCGCTGTACTTCGCTTCGAGTGGGTTGAAGACTGACGTGACAAAGATACGTGGCGGGACGGCGTGGGGGCTGTTAGTGCTGGTGATATCGACGGCGTGCGCGGGGAAGATTCTTGGGACGTTCGTGGCGGCGTTGATGTGCATGATTCCGGCGAGGGAGGCGCTGACACTTGGCGTTCTCATGAACACCAAGGGACTCGTGGAGCTCATCGTACTCAACATTGGAAAGGAGAAAAAGGTTCTAAACGACGAGATATTTGCAATCTTGGTGCTGATGGCATTGTTCACAACCTTCATAACAACCCCGATGGTAATGGCCATTTACAAACCAGCACGTGGCATCGCCATGAAGACCCACCGCAACCTCGGCGACCTAACCTCCAACTCCGGCAGCAAACACGTCAAAGATGAGCTCCGAATCCTAGCTTGCGTCCATGGCCCCGGCAATGTCCCTTCCATCATAAGCCTCATTGAGTCAACTCGCAGCACCAAAAATTCCTTAGTCAAACTCTTCATCATGCACCTCGTCGAGCTTACAGAGCGATCCTCCTCCATTGTCATGGTACAGCGTGTCAGAAAGAACGGCTTCCCATTCTTTAAGCGGTCGTCCCACCGCGAGTGGCGCGACCGCTTGGCTGGGGCCTTCCAGGCTTACAGCCAATTGGGCCGGGTTAGGGTCCGGCCCACTACTGCCATCTCTTCTTTGTCCACAATGCACCAGGATATATGCCACGTGGCAGAGGAAAAGAGAGTGACCATGATCATCCTGCCGTTCCACAAGCAGTGGAGAGTGGAAGGTGATGACGAGGACAATGGTGGGGTCCACGAGGTGTTGGAAAACGTGGGACATGGATGGAGAGGTGTGAACCAGAAGGTGCTCAAGCACGCGCCTTGTTCTGTGGGTGTGTTAGTGGACCGGGGTTTTGGAAGTGGGTCGCAGACTCCAGGCCCAACTAGCACGATGGCCCAACGGGTTTGCATTTTGTTCTTTGGTGGGCCGGATGATCGAGAGGCCTTGGAGTTGGGTGGGAGAATGGCTGAGCACCCTATTGTTAGGGTCACTATTATTAGGTTCGTTGAGCAAGATGAATCCAACGGTAGAAACATTGTGTTACACCCCTCGCCGAATGCCAATACCGACCAAAGTTATAGCTTCTCAACCGCTAAAATGAACCGCGAAATTGAGAAGGAGTTGGATGAGAAGGCAATGGAAGAGTTTAGAGGGAGGTGGGGAGGGATGGTTGGGTATGTTGAGAAAGCGAGTGAGAATGTTGTGGAAGAGGCACTAAGCATAGGGAAATGTGGAGATTATGATCTTATAGTAGTTGGGAAGGGCAGGTTTCCGTCAAGTATGGTGGCAAACTTGGCGGAGAGGCCGGCGGAGCACGCGGAGTTGGGTCCCATTGGGGATGTTCTAGCATGTTCAGGGCAGGGAGTGGTGACATCAGTGTTGGTAATTCAACAACATGATGTAGCTTTGACGGATGAGGCACCGGCATTGAGGGTGTTACATGGTGGCTATGACAATGCGAGAGTAGTGGATAATGATTCATCAGCCAGTGGCAATAAAGAAATTTCATCAGCTGACAACAATGATATAGTGTGA 2571 0.5449 MAPNITSIKTSSSGAWQGDNPLDFAFPLLIVQTTLILIVTRILAFFFKPLRQPKVIAEIVGGIVLGPSALGRSKAYLNRLFPSWSTPILESVASIGLLFFLFLVGLELDLNSIRRSGRRAFGIAAAGISLPFISGIGVAFILRKTVDGADKVGYGQFLVFMGVALSITAFPVLARILAELKLLTTPVGETAMAAAAFNDVAAWILLALAVALAGNADGSHKSPLVSVWVLLSGAAFVIFMMTVIRPAMKLVARRCSAEHDAVDEAYICLTLAGVMVSGFLTDLIGIHSIFGAFVFGLTIPKGGDFAERLIERIEDFVSGLLLPLYFASSGLKTDVTKIRGGTAWGLLVLVISTACAGKILGTFVAALMCMIPAREALTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPMVMAIYKPARGIAMKTHRNLGDLTSNSGSKHVKDELRILACVHGPGNVPSIISLIESTRSTKNSLVKLFIMHLVELTERSSSIVMVQRVRKNGFPFFKRSSHREWRDRLAGAFQAYSQLGRVRVRPTTAISSLSTMHQDICHVAEEKRVTMIILPFHKQWRVEGDDEDNGGVHEVLENVGHGWRGVNQKVLKHAPCSVGVLVDRGFGSGSQTPGPTSTMAQRVCILFFGGPDDREALELGGRMAEHPIVRVTIIRFVEQDESNGRNIVLHPSPNANTDQSYSFSTAKMNREIEKELDEKAMEEFRGRWGGMVGYVEKASENVVEEALSIGKCGDYDLIVVGKGRFPSSMVANLAERPAEHAELGPIGDVLACSGQGVVTSVLVIQQHDVALTDEAPALRVLHGGYDNARVVDNDSSASGNKEISSADNNDIV 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151541g00001 856 Gene3D - 28 435 IPR038770 -
Stsc151541g00001 856 Gene3D - 487 787 - -
Stsc151541g00001 856 MobiDBLite consensus disorder prediction 836 856 - -
Stsc151541g00001 856 Pfam Sodium/hydrogen exchanger family 36 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc151541g00001 856 PANTHER CATION/H + ANTIPORTER 9 812 - -
Stsc151541g00001 856 FunFam Cation/H(+) antiporter 15 28 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151541g00001 Stsc-Chr151541 2019 8760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151541g00001 75 818 Antiporter Super Family AT3G53720 68.833 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151541g00001 K26731 - jre:108999019 1222.61