Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151538g00006 ATGTTCTCTTCCACCAACCCTTCTTCTTCGTCATCTTCTTCTTACCCTCTTCCTCCTCCTCCTCATCCCTTCTACAATAATAACTATCATCCCTTTTTTGCTGTTGCAAATGGTAGTGATGGCAGTAGTAGTACCAATTTTATGTTTGACCCATCATCACCACTTGGTACTAATACTACTCATCAAGCTCCATTACTCTTTCCAGAAACTGCAGTACCAACCAATCTGACTGTTGCTGACTATGCTACCATGCTCCAAAGAAGGGATTATTCCTATTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGTCGATGGTGGTGTGTTTGGTGGTCAGAACTTGTTGACAAAGAAAGGAGGTGGAGTAGGGAAGAAAGACAGGCACAGCAAGATTTATACATCTCAGGGTTTGAGGGACAGAAGGGTGAGGCTTTCCAGTGACATTGCTAGAAAGTTCTTTGATCTTCAAGACATGCTTCAGTATGACAAGGCCAGCAACACCCTCCAATGGCTCTTCACCAAATCTGAGAATGCCATCAGAGACCTTGCAAGGACCAAGCACTCTTCCATTCAGGATCAAAACTACTGGCTCACCTGCTTCTCTCCCTCTCCCAAAAATGCAAAATATTCTAATAAGGACTCATCAATGGACAAAAGGCCTACTACTACTACTACTTCTACTTCTTCTTCCAAGAAAGACAACAGAACTCATTCATCAGATCCTCCTCCTCCTCCTCATCATCAATTTATGATGCCACCATCAATTGATGTTGACCCTCATCAAGAGCAGATTCATGACCCTAATCTATTGAGAACCAATTTCATGAACCTTGACATCCCTCATCATCAGAGCGAGCTTCAAATCTTTGGAAATTAA 897 0.4002 MFSSTNPSSSSSSSYPLPPPPHPFYNNNYHPFFAVANGSDGSSSTNFMFDPSSPLGTNTTHQAPLLFPETAVPTNLTVADYATMLQRRDYSYYNNNNNNNNNNNNNNNNNVDGGVFGGQNLLTKKGGGVGKKDRHSKIYTSQGLRDRRVRLSSDIARKFFDLQDMLQYDKASNTLQWLFTKSENAIRDLARTKHSSIQDQNYWLTCFSPSPKNAKYSNKDSSMDKRPTTTTTSTSSSKKDNRTHSSDPPPPPHHQFMMPPSIDVDPHQEQIHDPNLLRTNFMNLDIPHHQSELQIFGN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151538g00006 298 ProSiteProfiles TCP domain profile. 131 189 IPR017887 -
Stsc151538g00006 298 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 103 241 IPR005333 GO:0003700
Stsc151538g00006 298 MobiDBLite consensus disorder prediction 93 134 - -
Stsc151538g00006 298 MobiDBLite consensus disorder prediction 214 239 - -
Stsc151538g00006 298 MobiDBLite consensus disorder prediction 93 116 - -
Stsc151538g00006 298 MobiDBLite consensus disorder prediction 214 268 - -
Stsc151538g00006 298 Pfam TCP family transcription factor 130 241 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151538g00006 Stsc-Chr151538 37361 38469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151538g00006 122 202 TCP Transcription Factor Family AT1G67260 56.790 1.66e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc151538g00006 TCP 9.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151538g00006 - - aip:107640299 207.223