Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151535g00004 ATGGAAGAAATTAAAGTTGAAATCATTTCTAAAGAAGACATTAAGCCTTCTTCTCCAACACCCTCTCACCTAAGAACCTTTAAACACTCCATTTTGGATCAAGTCTTTCCCTATCCATATACTATAATCATTCTATTCTACACCTCACACAATCTCTCTGAATTCCCCAAGAGATTAGAATTGCTTAAACAATCACTATCTGAGACACTAACCCATTTCTACCCCCTTGGTGGCAGGATCAAAGATGATTTGTCCATTGATTGCAATGATGAATGTGCTAATTTTGTAGTTACAAAAATAAACTGTCCTATTACAAAGATTCTAAGCAAGCCTGATATATATTCATTGGAAAAGTTTCTTCCGGTTTCTATCTCTCAAAGAAAATCAATACGAGATCATGTCATTAACATTCAAGTAAATGTCTTTGATTGCGGCGGAATTGCCATTGGATTTTGCATTTCTCATAGGATCCTTGACGCCGATTCACTTAGCACCTTTCTGAAGGTGTGGACAGAAAGAATCAATCAGAATTGCAATTTGAAACCATTGACTAAACCGAACTTTGAAACAATTTCTCTCTTCCCTACAAGTACTTTACATTTTAGAGATGTATCAAAGAAGCTTTGGGGTTCTGCATTAAAGGAAACAAAATGGATCACTAGAAGGTTTTTGTTCACAAATTCAACTATAGCCACCTTGAAAGCTCAAATTTTAGAGAATCATCATCCTACTCGTGTCGAAATAGTTTCTGCCTTGTTGTGGAAGTTTTTCATGGCCGCGTCGAAGGCACATTCTGAAACTCAAAAGCCTTCTTTGGTGACTCATGCGGTGAACCTTCGCAAAAGAATGGACGAATCTCTTCGTCCCGAGAATTCTATAGGGAATTTTCTTTGGTTCTCTATAGCAAAACACATGGATGAACACGAGTCGAGTTTAGATGAACTGGTGAGTAAATTGAAGAAGTCAATTCAACAAGTTGATAAGCATCTTGATGCAAGATTCCAAAGTGATCATGAGGAGGGAAGTTCAATTATTGAAGATGGTCTTAGGAATCGTTTGAGTAAAACAAGGGTTGAAGCATTGGAAAGACTAGCTCTTAATAGTTGGTGTAATTTTGAATTCTATGATGCTTATTTAACCTATGTGGTTATGCAACTCTTGATCCAAGACCTCTTGACACAGGGATGTACAAGGTCTAGCTCAAGTCTCCACTTCCTCTCTCCCGCAATCCACCCCTCCTCCAGATCAAGCATCTGCGCTCACTCTCGCTCTTCCCGTCGTCTCACAGTGATGACAGAGAACAATTCCAATAGCCATGATAGTGATGACGATGGTGTTGATGTGATGAAGACGACTGCGCGATCAGAATCTATACGATTGGGAGAGGCCGTCTAG 1395 0.3914 MEEIKVEIISKEDIKPSSPTPSHLRTFKHSILDQVFPYPYTIIILFYTSHNLSEFPKRLELLKQSLSETLTHFYPLGGRIKDDLSIDCNDECANFVVTKINCPITKILSKPDIYSLEKFLPVSISQRKSIRDHVINIQVNVFDCGGIAIGFCISHRILDADSLSTFLKVWTERINQNCNLKPLTKPNFETISLFPTSTLHFRDVSKKLWGSALKETKWITRRFLFTNSTIATLKAQILENHHPTRVEIVSALLWKFFMAASKAHSETQKPSLVTHAVNLRKRMDESLRPENSIGNFLWFSIAKHMDEHESSLDELVSKLKKSIQQVDKHLDARFQSDHEEGSSIIEDGLRNRLSKTRVEALERLALNSWCNFEFYDAYLTYVVMQLLIQDLLTQGCTRSSSSLHFLSPAIHPSSRSSICAHSRSSRRLTVMTENNSNSHDSDDDGVDVMKTTARSESIRLGEAV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151535g00004 464 Gene3D - 216 380 IPR023213 -
Stsc151535g00004 464 Coils Coil 305 325 - -
Stsc151535g00004 464 Gene3D - 3 202 IPR023213 -
Stsc151535g00004 464 PANTHER F21J9.9 7 377 - -
Stsc151535g00004 464 Pfam Transferase family 5 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151535g00004 Stsc-Chr151535 16462 18465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151535g00004 4 172 Monolignol Biosynthesis Gene Families AT5G48930 27.586 2.89e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151535g00004 - - aip:107628104 489.189