Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151535g00002 ATGGAAGAATTTAAGGTTGAAGAAATTTCCAGAGAAGACATTAAGCCTTCTTCTCCCACACCCTCTCACCTAAGAACCTTCAAACACTCTATTTTGGATCAAGCTAATCTTTTTCATTATGGCCCAGTTGTTGTATTCTACATCTCACACAATCTCTCTGAATTCCCCAAGAGATTAGAATTGCTTAAACAATCACTATCTGAGACACTAACCCATTTCTACCCTCTTGGTGGCAGGATCAAAGATGATTTTTCCATTGATTGCAATGATGAAGGTGCTAATTTTGTAGTAGCAAAAGTGAACTGTCCTATTGCAAAGTTTCTAAGCAAGCCTGATATATATTCATTGGAAAAGTTTCTTCCGATTTCATTTCTCCATGAAACATCAATAGGAGATCATGTAACTAACATTCAAGTCAATGTCTTTGATTGTGGCGGAATTGCCATTGGATTTTGCATTTCTCATAGGATCACCGATGGCGCTTCATTTAGCATCTTTATTAAGGCGTGGACAGAAAGAGCCAGCTACAACCACAATTCAGAACCTTTGGCAAAACCGAACTTTGCAACGATTTCTCTCTTCCCTGCAGCTACTTCACATTTTAGAGAGATATCAAACCAACCTATAGCCACCCTCAAGGCTCAAATATTGGCGAAATCTTCGGCCGATCCATCGAAGAACCATCCTTCACATGTTCAAATAGTTTCTGCATTGTTGTGGAAGTGTTTCATGGTTGCTTCGAAGGCACAATTTGGAACTCAAAGGCCTTCTTTGGTGAACCATACGGTGAACCTTCGCCAGCTAATGGAAAAATCTCTTCATCCTGAGAATTCTATAGGGAATTTTCTTTGGTGCTGTACGGCAGAACACACAGGCGAACATGAGTTGAGTTTGGACGACTTAGTGAGCAAATTGAAGAACTCAATTCAACAAGTTGACAAGGATCTTGCTGCAAGATTTCAAAGATATGACGATGCAAGTTCAATTGTAGAAGATGATGTTAGGAATCTTGGCAGGAAAACAAGGGGTGACGCATTCGAAACATTATTTTTTTCCAGTTGGTATAACTTTGGAGTATATGATACTGATTTTGGGTGGGGAAAACCTATATGGGGGGGTCCTATTGATTTAAGAAATACTTTAATGTGTATGAATACAATTGTCTTGGTTCATACTAAGTTCAGAGATGGTATAGAAGCTTGGGTTACCTTGGAGGAGGAGAAAATGAAACATTTGGAGTCATGCCCTGAATTGCTCACTTATGCAACTCCTGATCCAAGTCCTTTGACAATGGGGTCTACAGGATCTAACTCAAAGTTATAG 1323 0.3946 MEEFKVEEISREDIKPSSPTPSHLRTFKHSILDQANLFHYGPVVVFYISHNLSEFPKRLELLKQSLSETLTHFYPLGGRIKDDFSIDCNDEGANFVVAKVNCPIAKFLSKPDIYSLEKFLPISFLHETSIGDHVTNIQVNVFDCGGIAIGFCISHRITDGASFSIFIKAWTERASYNHNSEPLAKPNFATISLFPAATSHFREISNQPIATLKAQILAKSSADPSKNHPSHVQIVSALLWKCFMVASKAQFGTQRPSLVNHTVNLRQLMEKSLHPENSIGNFLWCCTAEHTGEHELSLDDLVSKLKNSIQQVDKDLAARFQRYDDASSIVEDDVRNLGRKTRGDAFETLFFSSWYNFGVYDTDFGWGKPIWGGPIDLRNTLMCMNTIVLVHTKFRDGIEAWVTLEEEKMKHLESCPELLTYATPDPSPLTMGSTGSNSKL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151535g00002 440 MobiDBLite consensus disorder prediction 1 21 - -
Stsc151535g00002 440 Pfam Transferase family 4 418 - -
Stsc151535g00002 440 PANTHER F21J9.9 7 422 - -
Stsc151535g00002 440 Gene3D - 3 200 IPR023213 -
Stsc151535g00002 440 Gene3D - 201 419 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151535g00002 Stsc-Chr151535 3359 4743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151535g00002 14 413 Monolignol Biosynthesis Gene Families AT5G48930 25.113 6.36e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151535g00002 - - aip:107628104 549.666