Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151534g00006 ATGTTACCCAGCTGCAAATTTGGTTTTGATGTTAAGAATGAAATGAGTAACCACATAGCATCACAAGAAGCAAAAATCTTGGAGGATCAACAACAACTACAATTTGAAGCTTCTTGCAAGAAAGCTAGAGTGTCCATAAGAGCAAGATCAAATTTTTCTATGATGGTTGATGGGTGCCAATGGAGAAAATATGGACAAAAAACATCAAAGGGAAATCCTTGTCCTCGAGCCTACTATCGTTGTAGCATGTCACAAACATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCAATGGATGAGACAGTTCTGATCACAACATATGAGGGGAATCACAATCATCCACTCCCAGAAGCAGCAAGATCCATAGCCAACACAACATCATCAGCATTGAACATGTTCCTTTCTGGCTCCATCACCACCACTAACACTACTACTTCACTCTTAAACCCAACCCTACTCTCTCCATCATCATCATCAACATCATGTCCCACTCTAACACTGGACTTAACTACTCAGCAACCCTCCAATGTTATTGCATCATCAAACCACACACAACCATTGCTATTCCCTGTGCCTCTAAATGGAAGCTACACTGAACAAAACCAACAAGGAATGCTGTACTTGTCTTCTAATAGTAGTAAGCTTCCATTATCAGAAGAAAGTAACAAGCTTGCATTGGTGGATGTTGTTAGTGCAGCTTTAACCAATGATCCTTCTCTCAAGGAAGCATTAGTTGCTGCCTTTTCCTCACTCACTCAGAATAATAACAACATAATAGTCAATGAACATATTTAA 795 0.4013 MLPSCKFGFDVKNEMSNHIASQEAKILEDQQQLQFEASCKKARVSIRARSNFSMMVDGCQWRKYGQKTSKGNPCPRAYYRCSMSQTCPVRKQVQRCAMDETVLITTYEGNHNHPLPEAARSIANTTSSALNMFLSGSITTTNTTTSLLNPTLLSPSSSSTSCPTLTLDLTTQQPSNVIASSNHTQPLLFPVPLNGSYTEQNQQGMLYLSSNSSKLPLSEESNKLALVDVVSAALTNDPSLKEALVAAFSSLTQNNNNIIVNEHI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151534g00006 264 FunFam probable WRKY transcription factor 31 40 117 - -
Stsc151534g00006 264 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151534g00006 264 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151534g00006 264 Gene3D WRKY domain 39 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151534g00006 264 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 255 IPR044810 GO:0003700
Stsc151534g00006 264 SUPERFAMILY WRKY DNA-binding domain 49 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151534g00006 264 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151534g00006 Stsc-Chr151534 30751 32341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151534g00006 24 170 WRKY Transcription Factor Family AT4G04450 59.748 1.32e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151534g00006 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151534g00006 - - ahf:112722714 328.946