Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151532g00003 ATGCCATATCTAGGATATTGTGATTTCAGGGAGGTTTCTGATCGCGAATCAGCAAGGAGGTCAAGAAGAAGAAAACAAGCACGTTTAGCTGACCTTGAGATGCAGGTTGAAAAGCTGAAACTGGAAAATGCAACCCTATACAAGGAGTTTAATGATGTTAGACAACAATTACATGAGGCGGATACGAGAGCTAAGAAAATTGACAACCACTTTGCATCTACCATTCTATTTCCCGAACCTTTGCTGTCACACCTTCCTAAAGAAAAATAA 270 0.4 MPYLGYCDFREVSDRESARRSRRRKQARLADLEMQVEKLKLENATLYKEFNDVRQQLHEADTRAKKIDNHFASTILFPEPLLSHLPKEK 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151532g00003 89 PANTHER BASIC LEUCINE ZIPPER 63 10 62 - -
Stsc151532g00003 89 Coils Coil 15 56 - -
Stsc151532g00003 89 SMART brlzneu 1 66 IPR004827 GO:0003700|GO:0006355
Stsc151532g00003 89 Gene3D - 9 61 - -
Stsc151532g00003 89 Pfam bZIP transcription factor 10 56 IPR004827 GO:0003700|GO:0006355
Stsc151532g00003 89 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 10 67 IPR004827 GO:0003700|GO:0006355
Stsc151532g00003 89 FunFam BZIP transcription factor 9 56 - -
Stsc151532g00003 89 SUPERFAMILY Leucine zipper domain 10 57 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151532g00003 Stsc-Chr151532 13548 15297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151532g00003 13 62 bZIP Transcription Factor Family AT5G24800 60.000 8.08e-13 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc151532g00003 bZIP_1 2.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151532g00003 K25784 - gmx:778131 65.855