Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151531g00005 | ATGGCGGAGCCTCGGAAACAACCGGCTAACAACAGAACAAAGCAAAGGACTCAAGATTCCTCCAAGACCATGGCCAGAAAACTCCGCATAATCTACGCGGATCCCGAAGCAACAGACTCATCAGGCGATGAATCATCGGAGATGAACCAAAAGAGAATCAAGAGGAGAATCCATGAGATCCCTCTCCCTCTTGTTCTCTCCAGCCTCTCCACTCCCACCTCCTCCTCCGAGGTCAATGCAAAGACTCACAACCCCACCATCAAGAGGAGGGTTTCGCCGTCGACCGGCTGCAGGAGGCAAACCTCCGGCAAGTACAGAGGAGTTAGGCAGAGAAAGTGGGGTAAATGGGCTGCTGAGATTCGTGACCCTTTCAAGAGCGCACGCATCTGGTTGGGTACTTACAACACTGCCGAAGAAGCTTCTCAGGCCTACGAAGCTAAAAGGCTCGAGTTCGAAGCCATGGCTAGGTCCATGTCTCACTCACACTCTCAGAGCAACTCATCTCCTGCTCCCGCCGGAGTTTGTGTTTCCGACAACAAGTCCTCTACATCGGAGGATTCCGAAAGCGTTTTCTCGTACACATCTCCTTCCTCTGTTCTTGAGTTGGATACTTGTTCAGCTTCTCATGCTAATGAAGATGTTGAGACTAATGACTTGGTGGCTGAATTGGCTTCCTTGGAGATACCTGATTTGAGCATGCTGAACCTCCCTCCGCCACCCGAACAACCATCTTCTGCGGCTGTCGCTGTTGATGCTTGTGGTTCTGTGCCTGAGATAAGCCTTGGACTCGGTTTTGACTGGCTGAGTTTTGATGATTATGGACATGGGTTTGATGATCTTGGTGGCTTTGAGGATTTACAAATCTGCGGATTGGATGACAATGGGCCAAGCCAACTTCCTGATTTCGATTTTGATGATTTTGGTGGCGATGAGTTTGCTGGTTGGATTGAGGAACCCCTCAATATACCCTGCGCATAA | 978 | 0.501 | MAEPRKQPANNRTKQRTQDSSKTMARKLRIIYADPEATDSSGDESSEMNQKRIKRRIHEIPLPLVLSSLSTPTSSSEVNAKTHNPTIKRRVSPSTGCRRQTSGKYRGVRQRKWGKWAAEIRDPFKSARIWLGTYNTAEEASQAYEAKRLEFEAMARSMSHSHSQSNSSPAPAGVCVSDNKSSTSEDSESVFSYTSPSSVLELDTCSASHANEDVETNDLVAELASLEIPDLSMLNLPPPPEQPSSAAVAVDACGSVPEISLGLGFDWLSFDDYGHGFDDLGGFEDLQICGLDDNGPSQLPDFDFDDFGGDEFAGWIEEPLNIPCA | 325 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151531g00005 | 325 | PRINTS | Ethylene responsive element binding protein signature | 127 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc151531g00005 | 325 | PRINTS | Ethylene responsive element binding protein signature | 105 | 116 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc151531g00005 | 325 | SMART | rav1_2 | 104 | 167 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc151531g00005 | 325 | MobiDBLite | consensus disorder prediction | 157 | 190 | - | - | |
Stsc151531g00005 | 325 | CDD | AP2 | 104 | 151 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc151531g00005 | 325 | MobiDBLite | consensus disorder prediction | 68 | 101 | - | - | |
Stsc151531g00005 | 325 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Stsc151531g00005 | 325 | Pfam | AP2 domain | 104 | 153 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc151531g00005 | 325 | ProSiteProfiles | AP2/ERF domain profile. | 104 | 161 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc151531g00005 | 325 | MobiDBLite | consensus disorder prediction | 68 | 105 | - | - | |
Stsc151531g00005 | 325 | MobiDBLite | consensus disorder prediction | 155 | 190 | - | - | |
Stsc151531g00005 | 325 | PIRSF | PTI6 | 6 | 237 | IPR017392 | GO:0003700 | |
Stsc151531g00005 | 325 | PIRSF | PTI6 | 269 | 309 | IPR017392 | GO:0003700 | |
Stsc151531g00005 | 325 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 24 | 224 | - | - | |
Stsc151531g00005 | 325 | SUPERFAMILY | DNA-binding domain | 104 | 151 | IPR016177 | GO:0003677 | |
Stsc151531g00005 | 325 | MobiDBLite | consensus disorder prediction | 32 | 51 | - | - | |
Stsc151531g00005 | 325 | Gene3D | AP2/ERF domain | 103 | 158 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151531g00005 | Stsc-Chr151531 | 29103 | 30080 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151531g00005 | 26 | 324 | AP2-EREBP Transcription Factor Family | AT1G68550 | 38.019 | 9.99e-39 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Stsc151531g00005 | AP2 | 1.6e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151531g00005 | - | - | gmx:100306276 | 307.375 |